ID   C3Z2N5_BRAFL            Unreviewed;       339 AA.
AC   C3Z2N5;
DT   28-JUL-2009, integrated into UniProtKB/TrEMBL.
DT   28-JUL-2009, sequence version 1.
DT   27-MAR-2024, entry version 71.
DE   RecName: Full=Histone deacetylase domain-containing protein {ECO:0000259|Pfam:PF00850};
DE   Flags: Fragment;
GN   ORFNames=BRAFLDRAFT_203636 {ECO:0000313|EMBL:EEN53286.1};
OS   Branchiostoma floridae (Florida lancelet) (Amphioxus).
OC   Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes;
OC   Branchiostomatidae; Branchiostoma.
OX   NCBI_TaxID=7739;
RN   [1] {ECO:0000313|EMBL:EEN53286.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=S238N-H82 {ECO:0000313|EMBL:EEN53286.1};
RC   TISSUE=Testes {ECO:0000313|EMBL:EEN53286.1};
RX   PubMed=18563158; DOI=10.1038/nature06967;
RG   US DOE Joint Genome Institute (JGI-PGF);
RA   Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U.,
RA   Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K.,
RA   Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J.,
RA   Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J., Kapitonov V.V.,
RA   Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A.,
RA   Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T.,
RA   Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H.,
RA   Satoh N., Rokhsar D.S.;
RT   "The amphioxus genome and the evolution of the chordate karyotype.";
RL   Nature 453:1064-1071(2008).
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DR   EMBL; GG666574; EEN53286.1; -; Genomic_DNA.
DR   RefSeq; XP_002597274.1; XM_002597228.1.
DR   AlphaFoldDB; C3Z2N5; -.
DR   STRING; 7739.C3Z2N5; -.
DR   eggNOG; KOG1344; Eukaryota.
DR   InParanoid; C3Z2N5; -.
DR   GO; GO:0000118; C:histone deacetylase complex; IBA:GO_Central.
DR   GO; GO:0004407; F:histone deacetylase activity; IBA:GO_Central.
DR   CDD; cd09993; HDAC_classIV; 1.
DR   Gene3D; 3.40.800.20; Histone deacetylase domain; 1.
DR   InterPro; IPR044150; HDAC_classIV.
DR   InterPro; IPR000286; His_deacetylse.
DR   InterPro; IPR023801; His_deacetylse_dom.
DR   InterPro; IPR037138; His_deacetylse_dom_sf.
DR   InterPro; IPR023696; Ureohydrolase_dom_sf.
DR   PANTHER; PTHR10625:SF33; HISTONE DEACETYLASE 11; 1.
DR   PANTHER; PTHR10625; HISTONE DEACETYLASE HDAC1-RELATED; 1.
DR   Pfam; PF00850; Hist_deacetyl; 1.
DR   PRINTS; PR01270; HDASUPER.
DR   SUPFAM; SSF52768; Arginase/deacetylase; 1.
PE   4: Predicted;
FT   DOMAIN          34..316
FT                   /note="Histone deacetylase"
FT                   /evidence="ECO:0000259|Pfam:PF00850"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:EEN53286.1"
SQ   SEQUENCE   339 AA;  37805 MW;  D84D3B848FCA5B22 CRC64;
     SHSTRLHEDI PQSKWPIVYS SDYNIGFLGL EKLHPFDSGK WGKVFRYLKE SGLLKDDDVV
     TPVEATEEDL LMVHSSGYLN SLKWSMVVAG ITEVPPVALL PNFIVQRKLL KPLRLQTGGT
     VMAGKLATER GWALNIGGGF HHCSAERGGG FCAYADITLS IKFLFERMEG ISKAMIVDLD
     AHQGNGHERD FINDSRVYIM DVYNRYIYPH DSYAKGAIRR KVELQAYTED DRYLSLVRKN
     LEKALEEFNP DIIVYNAGTD VLEGDPLGAL SISPEGIVQR DQLVFELARG KGRPRQIPIL
     MVTSGGYQKR TAQIIADSIK NLIAKGLISH QAAAVETEI
//