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C3YZ80

- C3YZ80_BRAFL

UniProt

C3YZ80 - C3YZ80_BRAFL

Protein
Submitted name:

Putative uncharacterized protein

Gene

BRAFLDRAFT_82922

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 26 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. damaged DNA binding Source: InterPro
    2. DNA-(apurinic or apyrimidinic site) lyase activity Source: InterPro
    3. hydrolase activity, hydrolyzing N-glycosyl compounds Source: InterPro
    4. zinc ion binding Source: InterPro

    GO - Biological processi

    1. base-excision repair Source: InterPro
    2. nucleotide-excision repair Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:BRAFLDRAFT_82922Imported
    OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
    Taxonomic identifieri7739 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
    ProteomesiUP000001554: Partially assembled WGS sequence

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    Interactioni

    Protein-protein interaction databases

    STRINGi7739.JGI82922.

    Family & Domainsi

    Keywords - Domaini

    Transmembrane, Transmembrane helixSAAS annotation

    Phylogenomic databases

    eggNOGiCOG0266.
    KOiK10569.

    Family and domain databases

    InterProiIPR013057. AA_transpt_TM.
    IPR015886. DNA_glyclase/AP_lyase_DNA-bd.
    IPR012319. DNA_glycosylase/AP_lyase_cat.
    IPR010979. Ribosomal_S13-like_H2TH.
    IPR000214. Znf_DNA_glyclase/AP_lyase.
    IPR010666. Znf_GRF.
    IPR001876. Znf_RanBP2.
    [Graphical view]
    PfamiPF01490. Aa_trans. 2 hits.
    PF06831. H2TH. 1 hit.
    PF06839. zf-GRF. 1 hit.
    PF00641. zf-RanBP. 2 hits.
    [Graphical view]
    SMARTiSM00547. ZnF_RBZ. 2 hits.
    [Graphical view]
    SUPFAMiSSF46946. SSF46946. 1 hit.
    SSF81624. SSF81624. 1 hit.
    PROSITEiPS51066. ZF_FPG_2. 1 hit.
    PS01358. ZF_RANBP2_1. 2 hits.
    PS50199. ZF_RANBP2_2. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    C3YZ80-1 [UniParc]FASTAAdd to Basket

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    MVEGPGCKLK GERLVRLKGQ RVVQTQWGRN RTRPEGAAKG SGAEQKDTTS    50
    EKSDHLVGLP LSNVETLGKE LFVYFGDFCL RVHFGMNGSV QIKGHRNKAF 100
    QKTSEPVLTL TLTVDSVSFH DCTVQIRSSS DCHDKYLQFQ SLDICSTHFS 150
    LSQATRTVSC HGDRMLCDVL LDQSVLPGVG NIIKNEVLQL KEEHVKHLVK 200
    MTRDFSMLFY KCRKEGRALS RHCKVYKRQW CGQCQGRITV CRMGENGRMT 250
    YFCEGCQTRD PETIINNRRI LPTKNSLIGW VTTGGHSRAD DQEWTCSVCT 300
    LINKGKAGMC SACGSPKPLS STGRLSDTEW TCSLCTLVND GDTKVCLVCE 350
    GPRSEPENSR EQLQRVIATS DGDSVHSSLP SVPDGTPSPC NGQVSRKREL 400
    PCSSGVIVTK PTIPASGKLA RLESAPLTSP SGTRVPSAAI GFNSDAAGNR 450
    LERPQHEITF HSNGSKVARG TEGSNTVMCC KQHNKWADDN FPLCNHGKRC 500
    VKRTVLKQGV NNGKNFYTCR LERGKQCPFF QHCALRKQFN IVVDGKKLRT 550
    EEPDIEKMSV GGGGGDGEGT RHPLKIFANI FISFIGAGVL GVPYAFKEAG 600
    IIEGMVIMSA VGVLSVKAML MIIDSKYKIN RDKRPKRTDD KEFAADIEME 650
    VLLDGDSAHG ENNGDLKTGG KQHRRQSSFD HHLEELDYGD VGFCCSYIIF 700
    ISQNLMHYVD NSHILFADFA NVFAYGVVFW FDFEHVSKVR IFIFTMFVVT 750
    TLYLVFGVCG YLSFGPETNS IITLNLPPGV FPLLVKGCLC FSLFFTYPVM 800
    MFPVVQILEK KWFRDPLKQT FLGNTLRACL VLTTGMVVLL IPSFSTIMSL 850
    LGSTCCALLA FILPGLFHMR IHRESISKCH YALDVFFIVL GVVG 894
    Length:894
    Mass (Da):99,118
    Last modified:July 28, 2009 - v1
    Checksum:iB17D959C0E9CA6F2
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei894 – 8941Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666566 Genomic DNA. Translation: EEN54151.1.
    RefSeqiXP_002598139.1. XM_002598093.1.

    Genome annotation databases

    GeneIDi7231589.
    KEGGibfo:BRAFLDRAFT_82922.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666566 Genomic DNA. Translation: EEN54151.1 .
    RefSeqi XP_002598139.1. XM_002598093.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7739.JGI82922.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7231589.
    KEGGi bfo:BRAFLDRAFT_82922.

    Phylogenomic databases

    eggNOGi COG0266.
    KOi K10569.

    Family and domain databases

    InterProi IPR013057. AA_transpt_TM.
    IPR015886. DNA_glyclase/AP_lyase_DNA-bd.
    IPR012319. DNA_glycosylase/AP_lyase_cat.
    IPR010979. Ribosomal_S13-like_H2TH.
    IPR000214. Znf_DNA_glyclase/AP_lyase.
    IPR010666. Znf_GRF.
    IPR001876. Znf_RanBP2.
    [Graphical view ]
    Pfami PF01490. Aa_trans. 2 hits.
    PF06831. H2TH. 1 hit.
    PF06839. zf-GRF. 1 hit.
    PF00641. zf-RanBP. 2 hits.
    [Graphical view ]
    SMARTi SM00547. ZnF_RBZ. 2 hits.
    [Graphical view ]
    SUPFAMi SSF46946. SSF46946. 1 hit.
    SSF81624. SSF81624. 1 hit.
    PROSITEi PS51066. ZF_FPG_2. 1 hit.
    PS01358. ZF_RANBP2_1. 2 hits.
    PS50199. ZF_RANBP2_2. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S238N-H82Imported.
      Tissue: TestesImported.

    Entry informationi

    Entry nameiC3YZ80_BRAFL
    AccessioniPrimary (citable) accession number: C3YZ80
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 26 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3