C3YYJ2 (C3YYJ2_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN54632.1

Gene names

ORF Names:

BRAFLDRAFT_118354 EMBL EEN54632.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	213 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the small GTPase superfamily. Rab family. RuleBase RU003315

Ontologies

Keywords
Ligand	GTP-binding RuleBase RU003312 Nucleotide-binding
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	protein transport Inferred from electronic annotation. Source: InterPro small GTPase mediated signal transduction Inferred from electronic annotation. Source: InterPro
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3YYJ2 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 88B5C0193848471F	FASTA	213	23,451
	10 20 30 40 50 60 MAARGAQRPN GTQGKICQFK LVLLGESAVG KSSLVLRFVK GQFHEYQEST IGAAFLTQTV 70 80 90 100 110 120 CLDDTTVKFE IWDTAGQERY HSLAPMYYRG AQAAIVVYDI TNQDTFERAK NWVKELQRQA 130 140 150 160 170 180 SPNIVIALSG NKADLANKRM VEYEEAQAYA EDNSLLFMET SAKTAMNVND IFLAIAKKLP 190 200 210 KNEPAGGAGN QAQGRRVDLK ETGNQQASST CCK

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN54632.1. Tissue: Testes EMBL EEN54632.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666565 Genomic DNA. Translation: EEN54632.1.
RefSeq	XP_002598620.1. XM_002598574.1.
UniGene	Bfl.13344.
3D structure databases
ProteinModelPortal	C3YYJ2.
ModBase	Search...
Protein-protein interaction databases
STRING	7739.JGI128622.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7217057.
KEGG	bfo:BRAFLDRAFT_118354.
Phylogenomic databases
eggNOG	COG1100.
KO	K07889.
OMA	GTQGKIC.
Family and domain databases
InterPro	IPR005225. Small_GTP-bd_dom. IPR001806. Small_GTPase. IPR003579. Small_GTPase_Rab_type. [Graphical view]
Pfam	PF00071. Ras. 1 hit. [Graphical view]
PRINTS	PR00449. RASTRNSFRMNG.
SMART	SM00175. RAB. 1 hit. [Graphical view]
TIGRFAMs	TIGR00231. small_GTP. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3YYJ2_BRAFL

Accession

Primary (citable) accession number: C3YYJ2

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)