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Protein
Submitted name:

Putative uncharacterized protein

Gene

BRAFLDRAFT_118354

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. GTP binding Source: UniProtKB-KW

GO - Biological processi

  1. protein transport Source: InterPro
  2. small GTPase mediated signal transduction Source: InterPro
Complete GO annotation...

Keywords - Ligandi

GTP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_118354Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
ProteomesiUP000001554 Componenti: Partially assembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI128622.

Structurei

3D structure databases

ProteinModelPortaliC3YYJ2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the small GTPase superfamily. Rab family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1100.
InParanoidiC3YYJ2.
KOiK07889.
OMAiSTQGKIC.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR003579. Small_GTPase_Rab_type.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
PRINTSiPR00449. RASTRNSFRMNG.
SMARTiSM00175. RAB. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.

Sequencei

Sequence statusi: Complete.

C3YYJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAARGAQRPN GTQGKICQFK LVLLGESAVG KSSLVLRFVK GQFHEYQEST
60 70 80 90 100
IGAAFLTQTV CLDDTTVKFE IWDTAGQERY HSLAPMYYRG AQAAIVVYDI
110 120 130 140 150
TNQDTFERAK NWVKELQRQA SPNIVIALSG NKADLANKRM VEYEEAQAYA
160 170 180 190 200
EDNSLLFMET SAKTAMNVND IFLAIAKKLP KNEPAGGAGN QAQGRRVDLK
210
ETGNQQASST CCK
Length:213
Mass (Da):23,451
Last modified:July 28, 2009 - v1
Checksum:i88B5C0193848471F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666565 Genomic DNA. Translation: EEN54632.1.
RefSeqiXP_002598620.1. XM_002598574.1.
UniGeneiBfl.13344.

Genome annotation databases

GeneIDi7217057.
KEGGibfo:BRAFLDRAFT_118354.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666565 Genomic DNA. Translation: EEN54632.1.
RefSeqiXP_002598620.1. XM_002598574.1.
UniGeneiBfl.13344.

3D structure databases

ProteinModelPortaliC3YYJ2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7739.JGI128622.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7217057.
KEGGibfo:BRAFLDRAFT_118354.

Phylogenomic databases

eggNOGiCOG1100.
InParanoidiC3YYJ2.
KOiK07889.
OMAiSTQGKIC.

Family and domain databases

Gene3Di3.40.50.300. 1 hit.
InterProiIPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR001806. Small_GTPase.
IPR003579. Small_GTPase_Rab_type.
[Graphical view]
PfamiPF00071. Ras. 1 hit.
[Graphical view]
PRINTSiPR00449. RASTRNSFRMNG.
SMARTiSM00175. RAB. 1 hit.
[Graphical view]
SUPFAMiSSF52540. SSF52540. 1 hit.
TIGRFAMsiTIGR00231. small_GTP. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82Imported.
    Tissue: TestesImported.

Entry informationi

Entry nameiC3YYJ2_BRAFL
AccessioniPrimary (citable) accession number: C3YYJ2
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: January 7, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.