C3YX63 (C3YX63_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN55081.1

Gene names

ORF Names:

BRAFLDRAFT_225095 EMBL EEN55081.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	354 AA.
Sequence status	Fragment.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Binds 1 zinc ion per subunit By similarity. RuleBase RU003983
Sequence similarities	Belongs to the peptidase M48B family. RuleBase RU003983

Ontologies

Keywords
Ligand	Zinc RuleBase RU003983
Molecular function	Hydrolase Metalloprotease RuleBase RU003983 Protease
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	CAAX-box protein processing Inferred from electronic annotation. Source: InterPro proteolysis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	metalloendopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEN55081.1

Sequences

	Sequence		Length	Mass (Da)
	C3YX63 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 97E18BB3B5D111DB	FASTA	354	40,089
	10 20 30 40 50 60 QILQSVTFVL LGTVFSTVTG LPWGLYSTFV IEDRHGFNKQ TLGFYFKDLA KKFVVTQLIS 70 80 90 100 110 120 LPVAAGLLYI IKAGGDYFFV YAWLFTFVVT MGLIFIYADY IAPLFDRFTP LPDGDLRTQI 130 140 150 160 170 180 ETLAASIDFP LYKIFVVEGS KRSSHSNAYF FGFYKNKRIV LFDTLLEENP VNKEAAAGET 190 200 210 220 230 240 AGDGSSEDSS DTAREKKKKI GCSNEEILAV LGHELGHWKL GHNLKNIIIS QVNTFLCFFL 250 260 270 280 290 300 FALLSNWKEL YAAFGFPDSQ PALIGLLIIF QFIFSPYNEL LSFLMTVLSR RFEFQADTFA 310 320 330 340 350 LGLNKGADLC TALIKLNKDN LGFPVHDWLY AAWHYSHPGL LERLRALDYK QKEQ

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN55081.1. Tissue: Testes EMBL EEN55081.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666562 Genomic DNA. Translation: EEN55081.1.
RefSeq	XP_002599069.1. XM_002599023.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7235598.
KEGG	bfo:BRAFLDRAFT_225095.
Phylogenomic databases
eggNOG	COG0501.
KO	K06013.
OMA	FVIEENH.
Family and domain databases
InterPro	IPR027057. CAXX_Prtase_1. IPR001915. Peptidase_M48. [Graphical view]
PANTHER	PTHR10120:SF17. PTHR10120:SF17. 1 hit.
Pfam	PF01435. Peptidase_M48. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YX63_BRAFL

Accession

Primary (citable) accession number: C3YX63

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)