Putative uncharacterized protein - Branchiostoma floridae (Florida lancelet)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN57569.1

Gene names

ORF Names:

BRAFLDRAFT_230614 EMBL EEN57569.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	1010 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	positive regulation of Ras GTPase activity Inferred from electronic annotation. Source: GOC small GTPase mediated signal transduction Inferred from electronic annotation. Source: InterPro
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	Ras GTPase activator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Experimental info

Non-terminal residue

1

EMBL EEN57569.1

Sequences

Sequence

Length

Mass (Da)

Tools

C3YQ65 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 8063CA53153F3DE4
Show »

FASTA

1,010

116,528

        10         20         30         40         50         60 
DPAKTLEALK NPDVFLHRVL PECAEPYQAS LEQAKAAKLE QGDDSGSSWV EHKTRQGHSY 

        70         80         90        100        110        120 
YFNLETMESS WLPPEGFSSS RTHLSREEIQ AALNDVTNAH DRQEEFEAHE DDIIKLQAYT 

       130        140        150        160        170        180 
RGMLARRRYK ERLDYFHQQL PAVVKIQSNY RGYQQRKKYQ DRLSVLHGNP WAIVKVKKYH 

       190        200        210        220        230        240 
LQLTMFFLPS QIQAYAKMWR ARRQYRQRLQ YFNENVASVV KLQAFFRSNM ARHDYHLLTH 

       250        260        270        280        290        300 
SDNPPLSVVR KFVHLLDPND VDYNEELEVQ KLRGQVVQDI RANQELENNL NLMDIKIGLL 

       310        320        330        340        350        360 
VKNRITLQDV ITHGKKLKKR QQSTSGGTTM HEKGGLKALH KDSRHKLEMY QNLFYLLQTN 

       370        380        390        400        410        420 
PVYLAKLIFE MPTGRTTKFM ESVILSLYNY AANAREEYLL LKLFKTALQE EIKNIVITDI 

       430        440        450        460        470        480 
ACPPSPRGTR GQSSLREIIQ PLVLTIIKDK EMRINSNPIE VYKIWVNTME SKTGETSKLP 

       490        500        510        520        530        540 
YDVTTEQALQ HPEVRERLEA SISQLRNVTD KFLNTITSSA EKIPYGMRFM AKVLKDSLHE 

       550        560        570        580        590        600 
KFPDATEAEV LKIVGNLLYY RYMNPAIVAP DGFDIIDVNA GVGLSPDQRR NLGSIAKLLQ 

       610        620        630        640        650        660 
FAASNKIFDG ENAHLSSLND YVSQAHEKFK KFFAAACDVP ELEEKFNIDE YSDFTMLNKP 

       670        680        690        700        710        720 
DALAPERQDP LHELLDDLGE APKLEDLIGD IPLDEKDPNL EVERDKLAKT EVSLTLTNKF 

       730        740        750        760        770        780 
EVPEGDDTDM KALYTRTKRL IVDVIRVQPG DNLTDILSTP TTLDQEDEHQ RLVKKREAQD 

       790        800        810        820        830        840 
EKSQKKGGLS RSQSAHGDNK LPVEAMKRKV LRHLRALEGV GLVSSTDNYQ VMINDIAKDI 

       850        860        870        880        890        900 
RNQRRYRIRR RQELLKLKET TKALESKSQF YEEQIDYYNQ YIKTCLDNLA KKKRRSKFLQ 

       910        920        930        940        950        960 
GGKEDKPKKA KPPLKYTGAR LHEKGVILEI DGLPPNQFKN VLFEIQETED AGKFEVSAKF 

       970        980        990       1000       1010 
MGVAMEKVDL NLQDLLQLQY EGVSVMNMFD KAKVNVNLLI FLLNRKFYGK

« Hide

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype."
US DOE Joint Genome Institute (JGI-PGF)
Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.

Rokhsar D.S.
Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S238N-H82 EMBL EEN57569.1.
Tissue: Testes EMBL EEN57569.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666540 Genomic DNA. Translation: EEN57569.1.
RefSeq	XP_002601557.1. XM_002601511.1.
UniGene	Bfl.10783.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7248216.
KEGG	bfo:BRAFLDRAFT_230614.
Phylogenomic databases
eggNOG	COG5261.
KO	K16848.
OMA	MANIATV.
Family and domain databases
Gene3D	1.10.506.10. 2 hits.
InterPro	IPR000048. IQ_motif_EF-hand-BS. IPR001936. RasGAP. IPR000593. RasGAP_C. IPR023152. RasGAP_CS. IPR008936. Rho_GTPase_activation_prot. IPR001202. WW_dom. [Graphical view]
Pfam	PF00612. IQ. 3 hits. PF00616. RasGAP. 1 hit. PF03836. RasGAP_C. 1 hit. PF00397. WW. 1 hit. [Graphical view]
SMART	SM00015. IQ. 4 hits. SM00323. RasGAP. 1 hit. SM00456. WW. 1 hit. [Graphical view]
SUPFAM	SSF48350. Rho_GAP. 1 hit. SSF51045. WW_Rsp5_WWP. 1 hit.
PROSITE	PS50096. IQ. 4 hits. PS00509. RAS_GTPASE_ACTIV_1. 1 hit. PS50018. RAS_GTPASE_ACTIV_2. 1 hit. PS01159. WW_DOMAIN_1. 1 hit. PS50020. WW_DOMAIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YQ65_BRAFL

Accession

Primary (citable) accession number: C3YQ65

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequence annotation (Features)

Experimental info

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information