C3YMX6 (C3YMX6_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN58467.1

Gene names

ORF Names:

BRAFLDRAFT_274943 EMBL EEN58467.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	422 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	422	1	EMBL EEN58467.1

Sequences

	Sequence		Length	Mass (Da)
	C3YMX6 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: E710C1678EFC7881	FASTA	422	46,869
	10 20 30 40 50 60 MFYAHFILSK KGPLAKVWLA AHWDKKLTKQ HVFETSIEGS VESILHPKVK MALRTSGHLL 70 80 90 100 110 120 LGVVRIHNRK AKYLLADCNE AFVKIKMAFR PGVVDLPEEN REAAVATITL PEVFHDFDTT 130 140 150 160 170 180 VPDLNDFDMQ AFTMNQSRVE EITMREDVGN INMMETDAFD AFSEGDFELE VHSSIVVQME 190 200 210 220 230 240 KPLSYNLLLD SDHNKKDETV EKRHPELRYD DPIKDDFGGA PGDGILGADF LGATAGDLFG 250 260 270 280 290 300 EAPGATGDIS IGPEIAATPI PEQANDKERA GPSGELQPDQ NATAVADQTT LVPNEREAFA 310 320 330 340 350 360 LEPLEVTGVK ETRVRKKRKL IVDPVIELAS SEIRAQLEDT SDIVTTLDLA PPTKKLMQWK 370 380 390 400 410 420 EMGGVDKLFT MPCRAVGAKV LLAIFHRNLT TVIPEDLREE KGSTVDDEER METESTEMGR DD

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN58467.1. Tissue: Testes EMBL EEN58467.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666531 Genomic DNA. Translation: EEN58467.1.
RefSeq	XP_002602455.1. XM_002602409.1.
UniGene	Bfl.15254.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7209303.
KEGG	bfo:BRAFLDRAFT_274943.
Phylogenomic databases
eggNOG	NOG249424.
KO	K06670.
OMA	HLEYDDQ.
Family and domain databases
InterPro	IPR006910. Rad21_Rec8_N. [Graphical view]
Pfam	PF04825. Rad21_Rec8_N. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YMX6_BRAFL

Accession

Primary (citable) accession number: C3YMX6

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	February 6, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)