Putative uncharacterized protein - Branchiostoma floridae (Florida lancelet)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN58442.1

Gene names

ORF Names:

BRAFLDRAFT_199038 EMBL EEN58442.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	917 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	intrinsic to endoplasmic reticulum membrane Inferred from electronic annotation. Source: InterPro
Molecular function	transferase activity, transferring hexosyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

C3YMV1 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 270DA9F785FF1656
Show »

FASTA

917

104,442

        10         20         30         40         50         60 
MPLSLDVLAT PVLRCLHHIR LSRIIGMLLV ILIVIPLITH WYLGSVDGTN QRHDLPGVDS 

        70         80         90        100        110        120 
PGIFQDMDPK ELRHHVHELH RIKSSVSNEL LELESKRQRL QGSISHYNGE VEQAKVELET 

       130        140        150        160        170        180 
ARNELNALKL QLRQTQKELE ETMEAHRPRV AQPHRILPSE DDNVLIAPPA SSSSCRQHTC 

       190        200        210        220        230        240 
FDYSRCSLTS GFPVYVYPTD SIFPLDSYIQ DVTLSSLEQN LYLSSNPATA CVYVVIVGTL 

       250        260        270        280        290        300 
ASRLGAKDME RKLTSLPYWR GDGRNHLLVN IARDYSAENV LRNIETGRAM VVQSEFVFSQ 

       310        320        330        340        350        360 
YRAGFDIVIP PVFTWEAGRD AFDSIPPQVP AHRKHLFSFI GEKDSAGVIV SEKGELFYND 

       370        380        390        400        410        420 
ASSNRRGAAG EMDVLADLVA IENNDDDNLL VKVTCGGDSV RGLRGEWQLC GKPQERQQVL 

       430        440        450        460        470        480 
RESTFSIIIV AGKEENLSDF GRMLTTVRLY ESLKYGAVPV ILGEQVQLPF SEVIDWQQAA 

       490        500        510        520        530        540 
FVFPLARVSE LHFFLRTVSD SDLLRMRRQG RFLWETYLSS PQAVLNTVLS VVRTRISIPP 

       550        560        570        580        590        600 
KTVPEEPSPT VYNEDTYPLL LEEVEPISET GMEFGPVEPP YDSPKFLRNF TTSVVDKHTL 

       610        620        630        640        650        660 
WNSFPGPFYL YPYLPSDPVL PSEAKFMGSG LGFRPINKGS GGAGKEFQES LGGNVPREQF 

       670        680        690        700        710        720 
TIVMLTYERE SVLINSLQRL IGLPYLNKVL VVWNSPNLPS EDLRWPDIGV PIVVIRTKKN 

       730        740        750        760        770        780 
SLNNRFLPYD VIETEAILSI DDDAHLRHDE ILFGFRVWRE ARDRVVGFPG RFHAWDGSHQ 

       790        800        810        820        830        840 
SWLYNSNYSC ELSMVLTGAA FFHKYYAYLY SYVMPQVIRD KVDEYLNCED IAMNFLVSHI 

       850        860        870        880        890        900 
TRKPPIKVVT SRWTFRCPGC PQALSHDDSH FQERHKCINY FVQVYGYMPL LNTQFRVDSV 

       910 
LFKTRLPHDK QKCFKFI

« Hide

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype."
US DOE Joint Genome Institute (JGI-PGF)
Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.

Rokhsar D.S.
Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S238N-H82 EMBL EEN58442.1.
Tissue: Testes EMBL EEN58442.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666531 Genomic DNA. Translation: EEN58442.1.
RefSeq	XP_002602430.1. XM_002602384.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C3YMV1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7207679.
KEGG	bfo:BRAFLDRAFT_199038.
Phylogenomic databases
OMA	HDKQKCF.
PhylomeDB	C3YMV1.
Family and domain databases
InterPro	IPR004263. Exostosin. IPR015338. HexNAc_Trfase_a. [Graphical view]
KO	K02370.
Pfam	PF03016. Exostosin. 1 hit. PF09258. Glyco_transf_64. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YMV1_BRAFL

Accession

Primary (citable) accession number: C3YMV1

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information