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C3YM52 (C3YM52_BRAFL) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histone deacetylase PIRNR PIRNR037913

EC=3.5.1.98 PIRNR PIRNR037913
Gene names
ORF Names:BRAFLDRAFT_281552 EMBL EEN58646.1
OrganismBranchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]
Taxonomic identifier7739 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma

Protein attributes

Sequence length431 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone. PIRNR PIRNR037913

Subcellular location

Nucleus By similarity PIRNR PIRNR037913.

Sequence similarities

Belongs to the histone deacetylase family. HD Type 1 subfamily. PIRNR PIRNR037913

Sequences

Sequence LengthMass (Da)Tools
C3YM52 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 9B647A80C9E8953C

FASTA43149,185
        10         20         30         40         50         60 
MGSTKTVAYF FDPDVGNFHY GQGHPMKPHR LALTHSLVLH YGLYKRMQVY RPYRATVHDM 

        70         80         90        100        110        120 
CRFHSEDYID FLQRVTPQNV QNFTKSLQQF NVGDDCPVFP GLFNFCSMYT GATLEGAVKL 

       130        140        150        160        170        180 
NNNICDIAVN WAGGLHHAKK FEASGFCYVN DIVIGILELL KYHPRVLYVD IDIHHGDGVQ 

       190        200        210        220        230        240 
EAFYLTDRVM TVSFHKYGNH FFPGTGDMYE VGAEGGKYYS LNVPLKDGID DHNYRQLFNP 

       250        260        270        280        290        300 
IMQQVVEFFR PTCIVLQCGA DSLGCDRLGC FNLSVKGHGE CVSFMKGFNL PLLVLGGGGY 

       310        320        330        340        350        360 
TVRNVARCWT HETALLLDEE VNNELPYNEY FEYFSPDFTL HPDTSTRIEN CNTKGYLEQI 

       370        380        390        400        410        420 
RQTINDNLKS LSHAPSVQMH DIPPDLFSLE VVEEPDPDIR ESVQDQDNRI EPANEYYDGD 

       430 
KDQDRDNDLD V 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GG666529 Genomic DNA. Translation: EEN58646.1.
RefSeqXP_002602634.1. XM_002602588.1.
UniGeneBfl.13769.

3D structure databases

ProteinModelPortalC3YM52.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7739.JGI281552.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7235651.
KEGGbfo:BRAFLDRAFT_281552.

Phylogenomic databases

eggNOGCOG0123.
KOK11404.
OMANFHYGPG.

Family and domain databases

Gene3D3.40.800.20. 1 hit.
InterProIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSPR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNetSearch...

Entry information

Entry nameC3YM52_BRAFL
AccessionPrimary (citable) accession number: C3YM52
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: May 14, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)