C3YJV4 (C3YJV4_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN59411.1

Gene names

ORF Names:

BRAFLDRAFT_80392 EMBL EEN59411.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	531 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	methionyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: InterPro methionine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3YJV4 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: D6E5C7EC5D0E5B22	FASTA	531	60,270
	10 20 30 40 50 60 MCFPLPLVPH LGHLYSAVLA DTIHRWQQLK GAGGSVFSTG TDEHGLKIQQ AALAHGKDPQ 70 80 90 100 110 120 QFCDDVSRHF RDLFSKSHVG HTDFIRTTES RHRKAVEHFW RKLQSAGYIY QGKYEGWYST 130 140 150 160 170 180 SDEAFVPDNK VMESVDKATG KDIKVSIETG SQVEWMKEEN YMFRLSEFGP RLLEWLDSNP 190 200 210 220 230 240 RAVYPDKYRT LVRGWLGEGL EDLSVSRQRD RLPWGIPVPD DPTQTIYVWL DALVNYLTVC 250 260 270 280 290 300 GYPDNHHAHW PADCHVVGKD IVRFHAVYWP AFLMAAGLDP PRSVVTHSHW LMESQKMSKS 310 320 330 340 350 360 KGNVVDPFDR IQRYSADGLR YFLLKHGVLE ADGDYSDEKV VKVLNADLAG NIGGLLNRCL 370 380 390 400 410 420 ATSLNPTQTF PAFSANMFPV HPGTNSNTLA TEEDYKLLKT LQELPGSVDQ HYKNFHIYKV 430 440 450 460 470 480 LEETMLCVKQ ANGFVHRHKP WKLGNTPQDQ EWASTILHVA METLRVSGIL LQPVMPDLMS 490 500 510 520 530 GLLSRLGVEE TERSWSDAED VPCVKGREAP YVGRTLGTNR GVLFQRLQKK N

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN59411.1. Tissue: Testes EMBL EEN59411.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666520 Genomic DNA. Translation: EEN59411.1.
RefSeq	XP_002603400.1. XM_002603354.1.
3D structure databases
ProteinModelPortal	C3YJV4.
ModBase	Search...
Protein-protein interaction databases
STRING	C3YJV4.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7227291.
KEGG	bfo:BRAFLDRAFT_80392.
Phylogenomic databases
OMA	FWGVLKS.
PhylomeDB	C3YJV4.
Family and domain databases
InterPro	IPR015413. aa-tRNA-synt_I. IPR014758. Met-tRNA_synth. IPR014729. Rossmann-like_a/b/a_fold. IPR009080. tRNAsynth_1a_anticodon-bd. IPR013155. V/L/I-tRNA-synth_anticodon-bd. [Graphical view]
Gene3D	G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 2 hits.
KO	K01874.
Pfam	PF08264. Anticodon_1. 1 hit. PF09334. tRNA-synt_1g. 1 hit. [Graphical view]
PRINTS	PR01041. TRNASYNTHMET.
SUPFAM	SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMs	TIGR00398. MetG. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3YJV4_BRAFL

Accession

Primary (citable) accession number: C3YJV4

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)