C3YIZ9 (C3YIZ9_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN59661.1

Gene names

ORF Names:

BRAFLDRAFT_268634 EMBL EEN59661.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	248 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: InterPro
Molecular function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3YIZ9 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 43F385E427A4C793	FASTA	248	27,062
	10 20 30 40 50 60 MDLITQAKQS AAYQAIDNHV KNGQALGIGS GSTIVFAINR LAERVQEENL NVVCVPTSFQ 70 80 90 100 110 120 SKQLLTEKGL AVSDLERTPS LDVAIDGADE VDKDLNLIKG GGAACTQEKI VASCAKYFVV 130 140 150 160 170 180 IADHRKDSKL LGEQWKKGVP IEVIPMGYVP VIRAIEKKLG GKAELRMGAN KAGPVVTDNG 190 200 210 220 230 240 NFILDWKFDE TKDWKKVNME ISMIPGVVET GLFIDMAQRA YFGMPDGSVT FREKLSRNGT PECDESEK

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN59661.1. Tissue: Testes EMBL EEN59661.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666517 Genomic DNA. Translation: EEN59661.1.
RefSeq	XP_002603650.1. XM_002603604.1.
UniGene	Bfl.14000.
3D structure databases
ProteinModelPortal	C3YIZ9.
ModBase	Search...
Protein-protein interaction databases
STRING	C3YIZ9.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7251436.
KEGG	bfo:BRAFLDRAFT_268634.
Phylogenomic databases
OMA	GGDPEYR.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A. [Tree]
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
KO	K01807.
PANTHER	PTHR11934. RpiA. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. RpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3YIZ9_BRAFL

Accession

Primary (citable) accession number: C3YIZ9

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	November 16, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)