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Protein
Submitted name:

Putative uncharacterized protein

Gene

BRAFLDRAFT_126779

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_126779Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
ProteomesiUP000001554 Componenti: Partially assembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi7739.JGI126779.

Family & Domainsi

Sequence similaritiesi

Belongs to the class-II aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0016.
InParanoidiC3YGB0.
KOiK01889.
OMAiEFTHPKT.

Family and domain databases

Gene3Di3.30.70.380. 1 hit.
InterProiIPR006195. aa-tRNA-synth_II.
IPR002319. Phenylalanyl-tRNA_Synthase.
IPR005121. PheS_beta_Fdx_antiC-bd.
[Graphical view]
PfamiPF03147. FDX-ACB. 1 hit.
PF01409. tRNA-synt_2d. 2 hits.
[Graphical view]
SMARTiSM00896. FDX-ACB. 1 hit.
[Graphical view]
SUPFAMiSSF54991. SSF54991. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
PS51447. FDX_ACB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3YGB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAHQTTFCF TRRIMHLGCR QAPCSVRLSR TNFSSQATSP SKLDNDAVQV
60 70 80 90 100
LGNRYERDEW TNVTPQILSK VGRNLHNQQY HPLNLIKQRI HNHIYARYTH
110 120 130 140 150
RGNPLFSVYD YLSPATTTEQ SFDSVLIPKD HVTRRKQDNY YINSDHLLRP
160 170 180 190 200
HTSSHQRDLV KSGLDAFLVT GDVYRRDDID RSHYPVFHQM EGVRLFTKHT
210 220 230 240 250
LFEGVKGGHM LELFEEGRRV PEKQENHTLE AAKLVEHDLK QTLVALVKSL
260 270 280 290 300
FGEDLRTRWV DCYFPFTHPS FELEIWYGGE WLEVLGCGVM EQELLRRAGA
310 320 330 340 350
SDKVGWAFGL GLERLAMILY GIPDIRLFWS DDHGFLSQFK VNDINQPVKF
360 370 380 390 400
QPFQKYEPIV RDISFWIPPG FERADFLDLV RTVGADVIEE VSLYDEFVHP
410 420 430 440
KTKKTSNSYR IKYFQLERLL TNEEVSSIHK KIQDAAVQQL GVEGRF
Length:446
Mass (Da):51,902
Last modified:July 28, 2009 - v1
Checksum:i3230F31049F74ADB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666511 Genomic DNA. Translation: EEN60631.1.
RefSeqiXP_002604620.1. XM_002604574.1.
UniGeneiBfl.11424.

Genome annotation databases

GeneIDi7246391.
KEGGibfo:BRAFLDRAFT_126779.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666511 Genomic DNA. Translation: EEN60631.1.
RefSeqiXP_002604620.1. XM_002604574.1.
UniGeneiBfl.11424.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7739.JGI126779.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi7246391.
KEGGibfo:BRAFLDRAFT_126779.

Phylogenomic databases

eggNOGiCOG0016.
InParanoidiC3YGB0.
KOiK01889.
OMAiEFTHPKT.

Family and domain databases

Gene3Di3.30.70.380. 1 hit.
InterProiIPR006195. aa-tRNA-synth_II.
IPR002319. Phenylalanyl-tRNA_Synthase.
IPR005121. PheS_beta_Fdx_antiC-bd.
[Graphical view]
PfamiPF03147. FDX-ACB. 1 hit.
PF01409. tRNA-synt_2d. 2 hits.
[Graphical view]
SMARTiSM00896. FDX-ACB. 1 hit.
[Graphical view]
SUPFAMiSSF54991. SSF54991. 1 hit.
PROSITEiPS50862. AA_TRNA_LIGASE_II. 1 hit.
PS51447. FDX_ACB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: S238N-H82Imported.
    Tissue: TestesImported.

Entry informationi

Entry nameiC3YGB0_BRAFL
AccessioniPrimary (citable) accession number: C3YGB0
Entry historyi
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: June 24, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.