C3YGB0 (C3YGB0_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN60631.1

Gene names

ORF Names:

BRAFLDRAFT_126779 EMBL EEN60631.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	446 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	phenylalanyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro tRNA processing Inferred from electronic annotation. Source: InterPro
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro magnesium ion binding Inferred from electronic annotation. Source: InterPro phenylalanine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3YGB0 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 3230F31049F74ADB	FASTA	446	51,902
	10 20 30 40 50 60 MAAHQTTFCF TRRIMHLGCR QAPCSVRLSR TNFSSQATSP SKLDNDAVQV LGNRYERDEW 70 80 90 100 110 120 TNVTPQILSK VGRNLHNQQY HPLNLIKQRI HNHIYARYTH RGNPLFSVYD YLSPATTTEQ 130 140 150 160 170 180 SFDSVLIPKD HVTRRKQDNY YINSDHLLRP HTSSHQRDLV KSGLDAFLVT GDVYRRDDID 190 200 210 220 230 240 RSHYPVFHQM EGVRLFTKHT LFEGVKGGHM LELFEEGRRV PEKQENHTLE AAKLVEHDLK 250 260 270 280 290 300 QTLVALVKSL FGEDLRTRWV DCYFPFTHPS FELEIWYGGE WLEVLGCGVM EQELLRRAGA 310 320 330 340 350 360 SDKVGWAFGL GLERLAMILY GIPDIRLFWS DDHGFLSQFK VNDINQPVKF QPFQKYEPIV 370 380 390 400 410 420 RDISFWIPPG FERADFLDLV RTVGADVIEE VSLYDEFVHP KTKKTSNSYR IKYFQLERLL 430 440 TNEEVSSIHK KIQDAAVQQL GVEGRF

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN60631.1. Tissue: Testes EMBL EEN60631.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666511 Genomic DNA. Translation: EEN60631.1.
RefSeq	XP_002604620.1. XM_002604574.1.
UniGene	Bfl.11424.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	7739.JGI126779.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7246391.
KEGG	bfo:BRAFLDRAFT_126779.
Phylogenomic databases
eggNOG	COG0016.
KO	K01889.
OMA	SWELEIY.
Family and domain databases
Gene3D	3.30.70.380. 1 hit.
InterPro	IPR006195. aa-tRNA-synth_II. IPR002319. Phenylalanyl-tRNA_Synthase. IPR005121. PheS_beta_Fdx_antiC-bd. [Graphical view]
Pfam	PF03147. FDX-ACB. 1 hit. PF01409. tRNA-synt_2d. 2 hits. [Graphical view]
SMART	SM00896. FDX-ACB. 1 hit. [Graphical view]
SUPFAM	SSF54991. Fdx_AntiC_bd. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. PS51447. FDX_ACB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YGB0_BRAFL

Accession

Primary (citable) accession number: C3YGB0

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)