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Protein
Submitted name:

Uncharacterized protein

Gene

BRAFLDRAFT_92618

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTranscription, Transcription regulationPROSITE-ProRule annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:BRAFLDRAFT_92618Imported
OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
Taxonomic identifieri7739 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
Proteomesi
  • UP000001554 Componenti: Partially assembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi7739.JGI92618.

Structurei

3D structure databases

ProteinModelPortaliC3YFM2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini257 – 290CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini310 – 337C2H2-typeInterPro annotationAdd BLAST28
Domaini334 – 358C2H2-typeInterPro annotationAdd BLAST25
Domaini523 – 546C2H2-typeInterPro annotationAdd BLAST24
Domaini581 – 614CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini690 – 723CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini902 – 935CCHC FOG-typeInterPro annotationAdd BLAST34
Domaini1191 – 1224CCHC FOG-typeInterPro annotationAdd BLAST34

Sequence similaritiesi

Belongs to the FOG (Friend of GATA) family.PROSITE-ProRule annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG1721. Eukaryota.
COG5048. LUCA.
InParanoidiC3YFM2.
KOiK17441.
OMAiSHALEMH.

Family and domain databases

InterProiView protein in InterPro
IPR034731. ZF_CCHC_FOG.
IPR036236. Znf_C2H2_sf.
IPR013087. Znf_C2H2_type.
SMARTiView protein in SMART
SM00355. ZnF_C2H2. 12 hits.
SUPFAMiSSF57667. SSF57667. 8 hits.
PROSITEiView protein in PROSITE
PS51810. ZF_CCHC_FOG. 5 hits.
PS00028. ZINC_FINGER_C2H2_1. 4 hits.
PS50157. ZINC_FINGER_C2H2_2. 3 hits.

Sequencei

Sequence statusi: Complete.

C3YFM2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSGTFTEAFD NSGSLPGCLQ IEEKEGHVSL TAREELPDGM RWGPYGGVVI
60 70 80 90 100
GGEEKDPQKG LKVPCDEGEG FTVVLGDPSH WLLMLPPASS SGEHNTTICT
110 120 130 140 150
QDGSIWCVVT RTVAPGEALQ VHGLQEADFQ QEEADQDVLE DQDMAGYHGD
160 170 180 190 200
YQEDLSSPEE QDVSNFKVAK SESQTTSGSA DNLDTDDNKG SDDNIDETPT
210 220 230 240 250
LPQQKNTSDG PDNDISPGTS LIQAGPSSGI QSEHALEGMD MQDAKQQLIL
260 270 280 290 300
AWKMSNEGKV GVYDCEDCGI VYRNMDNLNA HKMYYCPGTQ RHQPPIVRGR
310 320 330 340 350
VLPSVLATVA QCPVCHKTFS NAGLLQVHML THTFTCPLCM AAFLNKAQLQ
360 370 380 390 400
QHLELEHSCS SVPKEAKTSP EMLSPSELSP RPPPVDGSKE GKFVCKVCWH
410 420 430 440 450
VAQDQDSLTR HMTSHISQAT VECTQCQVTL SGPAELLWHR QFHTQSPVSS
460 470 480 490 500
EEGTSHTLSR PASARSEHGA SPNVLKDQVL KTAIKKEPGL EEPCPEQLAV
510 520 530 540 550
KANSPRRRDK MPLSPQAGVA LVYRCPLCQY VANSAASVNR HLKMHTDPGV
560 570 580 590 600
TPNTIVTPSD KQASLPQSSL SPSQIPNKVA ADLPEGTYCL DCSIKFTSIN
610 620 630 640 650
NYFVHKKYYC STRHLSKYSR GSVTPFMTES PLYSSAQQEY SSPLPSRVSA
660 670 680 690 700
TNTIPVQNMA ASGLLNLPAL RRDVVSPSAV EPTLKCDEAE PPPSCHYCVE
710 720 730 740 750
CEISFNKYEN FAVHKQYYCA SRRAGTEKRQ ECVQPANCTI VRLSTDERLV
760 770 780 790 800
RGPGMVRAVQ NAAMAYCGVP NSNNAASVAV QTETQQEPDT STVDTDNKPT
810 820 830 840 850
PEASPQISPQ APAKDSPVTE EKQSPTQTAP TDNNQENVLN LVIKRSSSDT
860 870 880 890 900
IVENASSENG TTSQEQNNAS SSKEVRVNGE SSSEPIDLRC KKDEAEALSD
910 920 930 940 950
KFSLPNVFHC SACNIQYNKH ENYIAHKTYY CQATTLVDRN VADVGSSDHL
960 970 980 990 1000
SHGGKRRRSS PSQTQADAVA VTSSPRSPEP GPNQQPPFMC FCRQSFRTLE
1010 1020 1030 1040 1050
EMESHDCAPF QCPYCQFSAR TCSALMVHVK GHCESQLFRC SLCPFTVADM
1060 1070 1080 1090 1100
SALMEHWKDQ HAKPEDEQET TNVHQTKPEE THSNSSSSPD ENVHNSSQYK
1110 1120 1130 1140 1150
EPSPPQTSPK KPEAVQTVVK QEPYDPGYPE TSASCSTSNI DLPDRSTPNN
1160 1170 1180 1190 1200
SPGKSAEKVH PRASPGPAQY HLSSMLGKTN VIRHSSAALR RGPVCTKYCR
1210 1220 1230
SCDISFTNLS TFIAHKKFYC ASHAGENIVK
Length:1,230
Mass (Da):134,402
Last modified:July 28, 2009 - v1
Checksum:i755E766DDA904FA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG666509 Genomic DNA. Translation: EEN60985.1.
RefSeqiXP_002604975.1. XM_002604929.1.

Genome annotation databases

GeneIDi7240295.
KEGGibfo:BRAFLDRAFT_92618.

Entry informationi

Entry nameiC3YFM2_BRAFL
AccessioniPrimary (citable) accession number: C3YFM2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: October 25, 2017
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported