C3YFF0 (C3YFF0_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN60913.1

Gene names

ORF Names:

BRAFLDRAFT_264353 EMBL EEN60913.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	355 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	'de novo' pyrimidine base biosynthetic process Inferred from electronic annotation. Source: InterPro UMP biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	membrane Inferred from electronic annotation. Source: InterPro
Molecular function	dihydroorotate oxidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	168	1	Nucleophile By similarity PIRSR PIRSR000164-1

Sequences

	Sequence		Length	Mass (Da)
	C3YFF0 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 937A7A38C08ECDC8	FASTA	355	38,595
	10 20 30 40 50 60 MPCLRLVSAE SAHVLAVKTA SWGLAPKAWQ HKDSPILVRV WDRQFRNPIG LAAGFDKHGE 70 80 90 100 110 120 AVDGLLSMGF GFVEVGSITP QPQDGNPKPR VFRLLEDKAI INRYGFNSIG HEAVFERLQR 130 140 150 160 170 180 RAESMSSKGI LGINLGKNKT SPDAVGDYVE GVQKFGALAD YLVINVSSPN TPGLRTLQGR 190 200 210 220 230 240 QELEQLIDKV LEARRSLSCE RKPPLLVKIA PDLTQQDKED IAAVATRQKC AVDGLIVTNT 250 260 270 280 290 300 TISRPETLQS TNKTETGGLS GPPVRHMSTE TVRDMYKLTK GQLPIIGVGG VSCGADAYEK 310 320 330 340 350 IRAGASLVQL YTAMAYQGPP VVNRIKRELE KLLREDGFTS VSEAVGADHR ASTQT

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN60913.1. Tissue: Testes EMBL EEN60913.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666509 Genomic DNA. Translation: EEN60913.1.
RefSeq	XP_002604903.1. XM_002604857.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	C3YFF0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7212013.
KEGG	bfo:BRAFLDRAFT_264353.
Phylogenomic databases
OMA	AALNRMG.
PhylomeDB	C3YFF0.
Family and domain databases
InterPro	IPR013785. Aldolase_TIM. IPR012135. Dihydroorotate_DH_1_2. IPR005719. Dihydroorotate_DH_2. IPR001295. Dihydroorotate_DH_CS. [Graphical view]
Gene3D	G3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KO	K00254.
Pfam	PF01180. DHO_dh. 1 hit. [Graphical view]
PIRSF	PIRSF000164. DHO_oxidase. 1 hit.
TIGRFAMs	TIGR01036. PyrD_sub2. 1 hit.
PROSITE	PS00911. DHODEHASE_1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YFF0_BRAFL

Accession

Primary (citable) accession number: C3YFF0

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)