C3YDW8 (C3YDW8_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN61587.1

Gene names

ORF Names:

BRAFLDRAFT_227954 EMBL EEN61587.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	342 AA.
Sequence status	Fragment.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	protein N-linked glycosylation Inferred from electronic annotation. Source: InterPro
Cellular component	Golgi membrane Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL EEN61587.1

Sequences

	Sequence		Length	Mass (Da)
	C3YDW8 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 303D165832B2C6F3	FASTA	342	40,096
	10 20 30 40 50 60 VIPVLVIACN RPTVRRSLDL LVKHRPSEHQ FPIIVSQDCG HQETSTVIKS YGDKIAHYIQ 70 80 90 100 110 120 QPDLSDIPVP PNHKRLQGYY KISRHYKWAL NQVFNRLGYG SVLIVEDDLD IAPDFFDYFL 130 140 150 160 170 180 STLPLLQQDS SLWCVSAWND NGKEHMTDTN RQDLLYRTDF FPGLGWMMLK NLWDELEPKW 190 200 210 220 230 240 PASFWDDWMR HPDQRKDRAC IRPEICRTST FGRVGVSKGQ YFDKHLKFIK LNTKPFDFTH 250 260 270 280 290 300 TDLSYLLKDN YDRRFISEVY RSPQLTVKEV IANQHAEHNV VRVQYKTKEE FKGFAKQLGI 310 320 330 340 MDDLKAGVPR AGYHGIVSFM FKGRRVHLSP PADWTQYDPS WS

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN61587.1. Tissue: Testes EMBL EEN61587.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666504 Genomic DNA. Translation: EEN61587.1.
RefSeq	XP_002605577.1. XM_002605531.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7246814.
KEGG	bfo:BRAFLDRAFT_227954.
Phylogenomic databases
OMA	EPKWPAS.
PhylomeDB	C3YDW8.
Family and domain databases
InterPro	IPR004139. Glyco_trans_13. [Graphical view]
KO	K00726.
PANTHER	PTHR10468. Glyco_trans_13. 1 hit.
Pfam	PF03071. GNT-I. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3YDW8_BRAFL

Accession

Primary (citable) accession number: C3YDW8

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)