C3Y5V7 (C3Y5V7_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN64354.1

Gene names

ORF Names:

BRAFLDRAFT_126227 EMBL EEN64354.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus)

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	295 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the UPF0001 family. RuleBase RU004514

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	C3Y5V7 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 768557F05AA42857	FASTA	295	33,103
	10 20 30 40 50 60 MRRFAAMVDS EVGRALRSVL DRVQTAAAKR PEHLPKVQPR LVAVTKTKPK ELILSAYKAG 70 80 90 100 110 120 QRHFGENYVQ ELTDKASDPE IVGQLNDIRW HFIGHLQRNK VNKVTGIPNL YMVETVDSEK 130 140 150 160 170 180 LATAINASWE KLGRTDRLKV MIQVNTSREE QKHGTSPEKV CDLYKHVVEN CPHLQAVGIM 190 200 210 220 230 240 TIGVYDYDLR NGPNPDFQVL LECRTNICQT FNLQPEDVEL SMGMSTDFEH AIEVGSTNIR 250 260 270 280 290 VGSTIFGARQ YPGSKPPPKT TPNNPNATPN DQQQQTTTDK VESTRQKLDA VNVNS

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E.K., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.-K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W.H., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed: 18563158] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN64354.1. Tissue: Testes EMBL EEN64354.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666487 Genomic DNA. Translation: EEN64354.1.
RefSeq	XP_002608344.1. XM_002608298.1.
UniGene	Bfl.8170.
3D structure databases
ProteinModelPortal	C3Y5V7.
ModBase	Search...
Protein-protein interaction databases
STRING	C3Y5V7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7213982.
KEGG	bfo:BRAFLDRAFT_126227.
Phylogenomic databases
OMA	AVSKTFE.
PhylomeDB	C3Y5V7.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3Y5V7_BRAFL

Accession

Primary (citable) accession number: C3Y5V7

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)