C3Y4N1 (C3Y4N1_BRAFL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN64688.1

Gene names

ORF Names:

BRAFLDRAFT_58105 EMBL EEN64688.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	425 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423 Contains 1 lipoyl-binding domain. RuleBase RU000447

Ontologies

Keywords
Domain	Lipoyl RuleBase RU000447
Molecular function	Acyltransferase RuleBase RU003765 Transferase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	pyruvate metabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	pyruvate dehydrogenase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	dihydrolipoyllysine-residue acetyltransferase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3Y4N1 [UniParc]. Last modified July 28, 2009. Version 1. Checksum: 48A944BD3A8053D5	FASTA	425	44,892
	10 20 30 40 50 60 MEMGTIVSWE KQVGDQLNEG DLLAEIETDK ATMGFETPEE GYLARIFIEA GEKDIPIGKL 70 80 90 100 110 120 LCIIVENEDD IAKFKDWIPP ADAESAEKPL PKPVSESPST PPPAAAAPPP PPPPPMAAMP 130 140 150 160 170 180 PPPTPAAPPP TPGARVFASP LAKKLAADKG IDLSLVSGTG PGGRIRSQDI EAFTPAAAPA 190 200 210 220 230 240 PAVAPAAPAA APVGTFVDIP LTNVRKVIAS RLLQSKTTIP HYYLSVDINM DNVIALRKEL 250 260 270 280 290 300 NAIVEKEDVK LSVNDFIIKA AALSCLKVPE CNSSWMDSVI RQYNKVDVNV AVSTDSGLIT 310 320 330 340 350 360 PIVFNAHTKG LAAINSDVIS LAARAREGKL QLQEFQGGTF TVSNLGMFGI KNFSAVINPP 370 380 390 400 410 420 QACILAVGGA VKTVVPDADA ENGLSVATMM SVTLSCDHRV VDGAVGAQWL QEFKLYLEKP ETMLL

References

[1]

"The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J. , Kapitonov V.V., Kohara Y., Kuroki Y., Lindquist E., Lucas S., Osoegawa K., Pennacchio L.A., Salamov A.A., Satou Y., Sauka-Spengler T., Schmutz J., Shin-I T., Toyoda A., Bronner-Fraser M., Fujiyama A., Holland L.Z., Holland P.W., Satoh N., Rokhsar D.S. Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN64688.1. Tissue: Testes EMBL EEN64688.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666486 Genomic DNA. Translation: EEN64688.1.
RefSeq	XP_002608678.1. XM_002608632.1.
UniGene	Bfl.8179.
3D structure databases
ProteinModelPortal	C3Y4N1.
ModBase	Search...
Protein-protein interaction databases
STRING	7739.JGI58105.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7238166.
KEGG	bfo:BRAFLDRAFT_58105.
Phylogenomic databases
eggNOG	COG0508.
KO	K00627.
OMA	IVKESHE.
Family and domain databases
Gene3D	3.30.559.10. 1 hit. 4.10.320.10. 1 hit.
InterPro	IPR003016. 2-oxoA_DH_lipoyl-BS. IPR001078. 2-oxoacid_DH_actylTfrase. IPR000089. Biotin_lipoyl. IPR023213. CAT-like_dom. IPR004167. E3-bd. IPR006257. LAT1. IPR011053. Single_hybrid_motif. [Graphical view]
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00364. Biotin_lipoyl. 1 hit. PF02817. E3_binding. 1 hit. [Graphical view]
SUPFAM	SSF47005. E3_bd. 1 hit. SSF51230. Hybrid_motif. 1 hit.
TIGRFAMs	TIGR01349. PDHac_trf_mito. 1 hit.
PROSITE	PS50968. BIOTINYL_LIPOYL. 1 hit. PS00189. LIPOYL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3Y4N1_BRAFL

Accession

Primary (citable) accession number: C3Y4N1

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)