C3Y342 (C3Y342_BRAFL) Unreviewed, UniProtKB/TrEMBL
Last modified
April 3, 2013.
Version 30.
History...
Clusters with 
Names and origin
| Protein names | Submitted name: Putative uncharacterized protein EMBL EEN65454.1 | ||
| Gene names |
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| Organism | Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome] | ||
| Taxonomic identifier | 7739 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma |
Protein attributes
| Sequence length | 584 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Domain | Repeat RuleBase RU003532 WD repeat RuleBase RU000362 Zinc-finger RuleBase RU000353 |
| Ligand | Metal-binding Zinc |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular_function | zinc ion binding Inferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "The amphioxus genome and the evolution of the chordate karyotype." US DOE Joint Genome Institute (JGI-PGF) Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.  Rokhsar D.S.Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: S238N-H82 EMBL EEN65454.1. Tissue: Testes EMBL EEN65454.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | GG666482 Genomic DNA. Translation: EEN65454.1. |
| RefSeq | XP_002609444.1. XM_002609398.1. |
3D structure databases | |
| ProteinModelPortal | C3Y342. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 7241783. |
| KEGG | bfo:BRAFLDRAFT_93483. |
Phylogenomic databases | |
| eggNOG | COG2319. |
| KO | K10143. |
| OMA | TETHSTD. |
Family and domain databases | |
| Gene3D | 2.130.10.10. 1 hit. 3.30.40.10. 1 hit. |
| InterPro | IPR015943. WD40/YVTN_repeat-like_dom. IPR001680. WD40_repeat. IPR017986. WD40_repeat_dom. IPR001841. Znf_RING. IPR013083. Znf_RING/FYVE/PHD. IPR017907. Znf_RING_CS. [Graphical view] |
| Pfam | PF00400. WD40. 3 hits. [Graphical view] |
| SMART | SM00184. RING. 1 hit. SM00320. WD40. 4 hits. [Graphical view] |
| SUPFAM | SSF50978. WD40_like. 1 hit. |
| PROSITE | PS50082. WD_REPEATS_2. 1 hit. PS50294. WD_REPEATS_REGION. 1 hit. PS00518. ZF_RING_1. 1 hit. PS50089. ZF_RING_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C3Y342_BRAFL | ||||||||
| Accession | Primary (citable) accession number: C3Y342 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||