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C3Y342

- C3Y342_BRAFL

UniProt

C3Y342 - C3Y342_BRAFL

Protein
Submitted name:

Putative uncharacterized protein

Gene

BRAFLDRAFT_93483

Organism
Branchiostoma floridae (Florida lancelet) (Amphioxus)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 34 (01 Oct 2014)
      Sequence version 1 (28 Jul 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. zinc ion binding Source: InterPro

    Keywords - Ligandi

    Metal-binding, Zinc

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uncharacterized proteinImported
    Gene namesi
    ORF Names:BRAFLDRAFT_93483Imported
    OrganismiBranchiostoma floridae (Florida lancelet) (Amphioxus)Imported
    Taxonomic identifieri7739 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCephalochordataBranchiostomidaeBranchiostoma
    ProteomesiUP000001554: Partially assembled WGS sequence

    Interactioni

    Protein-protein interaction databases

    STRINGi7739.JGI93483.

    Structurei

    3D structure databases

    ProteinModelPortaliC3Y342.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    RepeatUniRule annotation, WD repeatUniRule annotation, Zinc-fingerUniRule annotationSAAS annotation

    Phylogenomic databases

    eggNOGiCOG2319.
    KOiK10143.
    OMAiTETHSTD.

    Family and domain databases

    Gene3Di2.130.10.10. 1 hit.
    3.30.40.10. 1 hit.
    InterProiIPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR017986. WD40_repeat_dom.
    IPR018957. Znf_C3HC4_RING-type.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view]
    PfamiPF00400. WD40. 3 hits.
    PF00097. zf-C3HC4. 1 hit.
    [Graphical view]
    SMARTiSM00184. RING. 1 hit.
    SM00320. WD40. 4 hits.
    [Graphical view]
    SUPFAMiSSF50978. SSF50978. 1 hit.
    PROSITEiPS50082. WD_REPEATS_2. 1 hit.
    PS50294. WD_REPEATS_REGION. 1 hit.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C3Y342-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAGRTPTRRR LKRPQPPIYN GIINTDEDKN NDFVCPICFD MIEEAHMTKC    50
    GHSFCFKCIQ QSLEESNRCP KCNFVIEKTD QIFPNFLLNE LILKHRQRLE 100
    ERKRVKLDQP NGMKLTEFQE LLSHEDDNLD ITDVNLMLEV LYQKKTRLEA 150
    DSIAAQNQIL KEFLQHARRR KQEINWYFSY LPLHFVQQLD KLMGEVSVLD 200
    QDMQRVQVSR YHWLNSTLAS RRTRLDQHFD DLEKCYFSIR LKEFGQTETH 250
    STDSLCEFTD SLTKFTKYSG FRPLATLSYA SDIYNGSSIV SSIEFDRDNE 300
    YFAIAGVTKK IKVFEYGTVI RDAVDIHYPC SEMACNSKIS CVCWSSYHKG 350
    MLASSDYEGT VTLWDAFNAT KSRMFQEHEK RCWSVDFNHV DPKLLASGSD 400
    DAKVKLWATN MEHSVACLEA KANVCCVKFN PNSRFHIAFG SADHCVHYYD 450
    LRNTRQALNV LKGHRKAVSY AKFVNSQEIV SAYHWLNSTL ASRRTRLDQH 500
    FDDLEKCYFS IRLKEFGQTE THSTDSLCEF TDSLTKFTKY SGFRPLATLS 550
    YASDIYNGSS IVSRYSSCHL TPCLIFIYKV LLSS 584
    Length:584
    Mass (Da):67,792
    Last modified:July 28, 2009 - v1
    Checksum:i51083F280AEE60B1
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666482 Genomic DNA. Translation: EEN65454.1.
    RefSeqiXP_002609444.1. XM_002609398.1.

    Genome annotation databases

    GeneIDi7241783.
    KEGGibfo:BRAFLDRAFT_93483.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    GG666482 Genomic DNA. Translation: EEN65454.1 .
    RefSeqi XP_002609444.1. XM_002609398.1.

    3D structure databases

    ProteinModelPortali C3Y342.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7739.JGI93483.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 7241783.
    KEGGi bfo:BRAFLDRAFT_93483.

    Phylogenomic databases

    eggNOGi COG2319.
    KOi K10143.
    OMAi TETHSTD.

    Family and domain databases

    Gene3Di 2.130.10.10. 1 hit.
    3.30.40.10. 1 hit.
    InterProi IPR015943. WD40/YVTN_repeat-like_dom.
    IPR001680. WD40_repeat.
    IPR017986. WD40_repeat_dom.
    IPR018957. Znf_C3HC4_RING-type.
    IPR001841. Znf_RING.
    IPR013083. Znf_RING/FYVE/PHD.
    IPR017907. Znf_RING_CS.
    [Graphical view ]
    Pfami PF00400. WD40. 3 hits.
    PF00097. zf-C3HC4. 1 hit.
    [Graphical view ]
    SMARTi SM00184. RING. 1 hit.
    SM00320. WD40. 4 hits.
    [Graphical view ]
    SUPFAMi SSF50978. SSF50978. 1 hit.
    PROSITEi PS50082. WD_REPEATS_2. 1 hit.
    PS50294. WD_REPEATS_REGION. 1 hit.
    PS00518. ZF_RING_1. 1 hit.
    PS50089. ZF_RING_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: S238N-H82Imported.
      Tissue: TestesImported.

    Entry informationi

    Entry nameiC3Y342_BRAFL
    AccessioniPrimary (citable) accession number: C3Y342
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 28, 2009
    Last sequence update: July 28, 2009
    Last modified: October 1, 2014
    This is version 34 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3