Putative uncharacterized protein - Branchiostoma floridae (Florida lancelet)

Preferred order of sections

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL EEN65367.1

Gene names

ORF Names:

BRAFLDRAFT_236233 EMBL EEN65367.1

Organism

Branchiostoma floridae (Florida lancelet) (Amphioxus) [Reference proteome]

Taxonomic identifier

7739 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Cephalochordata › Branchiostomidae › Branchiostoma

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	lysosome Inferred from electronic annotation. Source: InterPro
Molecular_function	exo-alpha-sialidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

Sequence

Length

Mass (Da)

Tools

C3Y2V5 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 2EC9FAE32785A874
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FASTA

369

41,326

        10         20         30         40         50         60 
MNYDDETFLP PQVAPIVVEE QLLWLAGTAG VGYYRIPLLS YTPQGSLIAV CEARKEGYAD 

        70         80         90        100        110        120 
FGPKFLAIRR STDKGLTWGP MDYVLDDGSF YDGISLGAIV VDDETGSVFI MYSHCPHYDH 

       130        140        150        160        170        180 
CTVSTTYLVE STDDGKTWSH PRNISEQVGT MMFAPGPGYG IQKKYEPHVG RLIVCGHSTL 

       190        200        210        220        230        240 
RGDGMFCLLS DDHGQNWRYG GMLRGIPYNQ NKKGGDFMPD ECQPIELPDG TIEVNIRNEG 

       250        260        270        280        290        300 
GYHCSCRMKV RSFDGGETFP LEHLTFDEAL IEPAVAAGLY YNNGVMFFSN PASTNSRSNL 

       310        320        330        340        350        360 
TLRWSYDSGT SWKDALQVWA QPSGYSTMTM LKSDPQDGEY LYMLYEKGRV NQTSYEMLSF 


TRISLYGFN

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References

[1]

"The amphioxus genome and the evolution of the chordate karyotype."
US DOE Joint Genome Institute (JGI-PGF)
Putnam N.H., Butts T., Ferrier D.E., Furlong R.F., Hellsten U., Kawashima T., Robinson-Rechavi M., Shoguchi E., Terry A., Yu J.K., Benito-Gutierrez E.L., Dubchak I., Garcia-Fernandez J., Gibson-Brown J.J., Grigoriev I.V., Horton A.C., de Jong P.J., Jurka J.

Rokhsar D.S.
Nature 453:1064-1071(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: S238N-H82 EMBL EEN65367.1.
Tissue: Testes EMBL EEN65367.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GG666482 Genomic DNA. Translation: EEN65367.1.
RefSeq	XP_002609357.1. XM_002609311.1.
UniGene	Bfl.11841.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7255390.
KEGG	bfo:BRAFLDRAFT_236233.
Phylogenomic databases
eggNOG	COG4409.
KO	K01186.
OMA	WAGPSGY.
Family and domain databases
Gene3D	2.120.10.10. 1 hit.
InterPro	IPR026942. Sialidase-1. IPR026856. Sialidase_fam. IPR011040. Sialidases. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit. PTHR10628:SF9. PTHR10628:SF9. 1 hit.
SUPFAM	SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3Y2V5_BRAFL

Accession

Primary (citable) accession number: C3Y2V5

Entry history

Integrated into UniProtKB/TrEMBL:	July 28, 2009
Last sequence update:	July 28, 2009
Last modified:	April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Preferred order of sections

Names and origin

Protein attributes

Ontologies

Sequences

References

Cross-references

Sequence databases

3D structure databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Family and domain databases

Entry information