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C3XPG8 (C3XPG8_BRAFL) Unreviewed, UniProtKB/TrEMBL

Last modified March 19, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length928 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m). RuleBase RU000617

Sequence similarities

Belongs to the ATP-dependent DNA ligase family.

Sequences

Sequence LengthMass (Da)Tools
C3XPG8 [UniParc].

Last modified July 28, 2009. Version 1.
Checksum: 3CD9F7EE4715580B

FASTA928103,861
        10         20         30         40         50         60 
MHRENKGLRT SRFCVEYAKQ GRAGCKKCKQ KIEKGLPRIG KIVPNFFHEG DGEMKQWYHV 

        70         80         90        100        110        120 
ACIFETFQRA RATTKKIEDA SDLEGWEDME DEEKQTILKL IKELESKAKS PKKKVVQATL 

       130        140        150        160        170        180 
STKGKIQSPT KKAASSATVS DDSPAAGPSS SSSASTSVSM TSPTPTPDID HKDNAFREFR 

       190        200        210        220        230        240 
RLCALIAEEP GYNAKTKLVS DFLKKGSNGD GFKGDTFLVV KLLLPGVVKR VYNLNNKQLL 

       250        260        270        280        290        300 
KHFANIFGVN LADMLTDLEL GDVSETVRKF FEESERCLPA KKSKLTIQEV DESLEILAQM 

       310        320        330        340        350        360 
TKEDDQMREL NKIAKKCTAN DLKVVVRLIK HDLRINAGAK HILEGLDPNA YPAFQASRNL 

       370        380        390        400        410        420 
ADVVERVVAN GCAPGMKKSL SIKANLMTPV LPMLAEACKS VEMAMRKCPN GMYAEIKYDG 

       430        440        450        460        470        480 
ERVQVHKQGN KFEYFSRSLK PVLPHKVAHF KDYIPKAFPH GSNMILDSEV LLVDTNTGNP 

       490        500        510        520        530        540 
LPFGTLGIHK KQQFSDAQVA LFVFDCIYFN GETLMDRPIS ERRKFLEDNM TVIPNRVVLS 

       550        560        570        580        590        600 
EYRYITEPGD LSDMIGRVIR DGLEGLVLKD TKSIYEPGKR HWLKVKKDYL EQGAMADTAD 

       610        620        630        640        650        660 
LVVLGAFYGT GNKGGLKSVF LMGVYDPDSD KWCTVTKCGN GHDDNTIAKL NKELAMVKIS 

       670        680        690        700        710        720 
KDMSKVPKWL KITKNLVPDF VCADPKKAPV WEITGAEFSK SEAHTADGIS IRFPRVTKIR 

       730        740        750        760        770        780 
DDKDWKSATN LKQLKHLFKT SKETSDIPDL LKGKGKSPRK PVKVKVEEED DDDDDDDDSN 

       790        800        810        820        830        840 
GGASSNGVTP IKGMKRKAEE DSPRTPKKSK PTCRYGATCY QTGKEHLDKF DHPTRKSPKK 

       850        860        870        880        890        900 
SNSAAKSVLP DVFCGIKLFL PDTVENYALL RRYFVAYDGD IVQDYAMSQA THVVEDPEQK 

       910        920 
NMNGKTDAQL VTVDWLWQCI KRKQLVPV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
GG666451 Genomic DNA. Translation: EEN69839.1.
RefSeqXP_002613830.1. XM_002613784.1.
UniGeneBfl.20221.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING7739.JGI119901.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7222688.
KEGGbfo:BRAFLDRAFT_119901.

Phylogenomic databases

eggNOGCOG1793.
KOK10776.
OMALFSEMKH.

Family and domain databases

Gene3D1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
3.30.1740.10. 1 hit.
3.40.50.10190. 1 hit.
InterProIPR001357. BRCT_dom.
IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
IPR019406. Znf_C2H2_APLF-like.
IPR001510. Znf_PARP.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
PF10283. zf-CCHH. 1 hit.
PF00645. zf-PARP. 1 hit.
[Graphical view]
SMARTSM00292. BRCT. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
SSF52113. SSF52113. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS50172. BRCT. 1 hit.
PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
PS00347. PARP_ZN_FINGER_1. 1 hit.
PS50064. PARP_ZN_FINGER_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3XPG8_BRAFL
AccessionPrimary (citable) accession number: C3XPG8
Entry history
Integrated into UniProtKB/TrEMBL: July 28, 2009
Last sequence update: July 28, 2009
Last modified: March 19, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)