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C3SE42 (C3SE42_ECOLX) Unreviewed, UniProtKB/TrEMBL

Last modified May 31, 2011. Version 10. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:ECs5346 EMBL ACI72746.1
OrganismEscherichia coli EMBL ACI72746.1
Taxonomic identifier562 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length322 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C3SE42 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: A09A43BD846B7DE6

FASTA32235,043
        10         20         30         40         50         60 
MPNITWCDLP EDVSLWPGLP LSLSGDEVMP LDYHAGRSGW LLYGRGLDKQ RLTQYQSKLG 

        70         80         90        100        110        120 
AAMVIVAAWC VEDYQVIRLA GSLTARATRL AHEAQLDVAP LGKIPHLRTP GLLVMDMDST 

       130        140        150        160        170        180 
AIQIECIDEI AKLAGTGEMV AEVTERAMRG ELDFTASLRS RVATLKGADA NILQQVRENL 

       190        200        210        220        230        240 
PLMPGLTQLV LKLETLGWKV AIASGGFTFF AEYLRDKLRL TAVVANELEI MDGKFTGNVI 

       250        260        270        280        290        300 
GDIVDAQYKA KTLTRLAQEY EIPLAQTVAI GDGANDLPMI KAAGLGIAYH AKPKVNEKAE 

       310        320 
VTIRHADLMG VFCILSGSLN QK 

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References

[1]"A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis."
Leopold S.R., Magrini V., Holt N.J., Shaikh N., Mardis E.R., Cagno J., Ogura Y., Iguchi A., Hayashi T., Mellmann A., Karch H., Besser T.E., Sawyer S.A., Whittam T.S., Tarr P.I.
Proc. Natl. Acad. Sci. U.S.A. 106:8713-8718(2009) [PubMed: 19439656] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 493/89 EMBL ACI72746.1, 86-24 EMBL ACI72747.1, 87-14 EMBL ACI72748.1, TB182A EMBL ACI72749.1 and TW14359 EMBL ACI72750.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU890160 Genomic DNA. Translation: ACI72746.1.
EU890161 Genomic DNA. Translation: ACI72747.1.
EU890162 Genomic DNA. Translation: ACI72748.1.
EU890163 Genomic DNA. Translation: ACI72749.1.
EU890164 Genomic DNA. Translation: ACI72750.1.

3D structure databases

ProteinModelPortalC3SE42.
SMRC3SE42. Positions 11-322.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR005834. Dehalogen-like_hydro.
IPR023214. HAD-like_dom.
IPR006383. HAD-SF_hydro_IB_PSP-like.
IPR023190. Pser_Pase_dom_2.
IPR004469. SerB.
[Graphical view]
Gene3DG3DSA:3.40.50.1000. HAD-like_dom. 2 hits.
G3DSA:1.10.150.210. Pser_Pase_dom_2. 1 hit.
PfamPF00702. Hydrolase. 1 hit.
[Graphical view]
SUPFAMSSF56784. HAD-like_dom. 1 hit.
TIGRFAMsTIGR01488. HAD-SF-IB. 1 hit.
TIGR00338. SerB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC3SE42_ECOLX
AccessionPrimary (citable) accession number: C3SE42
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 31, 2011
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)