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Protein
Submitted name:

NifS-like protein

Gene

spl1

Organism
Rickettsia africae (strain ESF-5)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotationSAAS annotation

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro
Complete GO annotation...

Keywords - Ligandi

Pyridoxal phosphateSAAS annotation

Enzyme and pathway databases

BioCyciRAFR347255:GJCT-633-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
NifS-like proteinImported
Gene namesi
Name:spl1Imported
Ordered Locus Names:RAF_ORF0675Imported
OrganismiRickettsia africae (strain ESF-5)Imported
Taxonomic identifieri347255 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000002305 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi347255.RAF_ORF0675.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IXOX-ray2.20A/B1-372[»]
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1104.
HOGENOMiHOG000017510.
KOiK04487.
OMAiTKRDHET.
OrthoDBiEOG62RSBK.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR000192. Aminotrans_V_dom.
IPR020578. Aminotrans_V_PyrdxlP_BS.
IPR016454. Cysteine_dSase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00266. Aminotran_5. 1 hit.
[Graphical view]
PIRSFiPIRSF005572. NifS. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00595. AA_TRANSFER_CLASS_5. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3PNQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIYLDHNATT FIDPRVKEFI ISLMDKELNP SSAHSSGRFA KNLIETVRAQ
60 70 80 90 100
IATALGITLS SREYDITFTS SGTEGNNLIM KNFYDGDIFI SAIEHLSIYN
110 120 130 140 150
HINYAPNIKV ISVNTQGLVD LEHLEELLAQ SNTSKKLVSI IMANNESGVL
160 170 180 190 200
QDIAEIGKIT KKYEAKFHSD LVQGFGRIPI NIKALGLDFA TISGHKIGGG
210 220 230 240 250
QGGAALISSS NFQITPMIIG GGQEKSVRSG TENVLAIAGF GLASALRTDN
260 270 280 290 300
ISENYIKIKK LQENLEKKLK KYPNVNIVSN NVARLPNTTL ITIPNTDAQA
310 320 330 340 350
KLIGFDLHNI CVSSGSACSS GKISKSHVLT NMGVGEEEAK SSIRISLSHT
360 370
NTVRDIEAFI EAFEEIYDVI PS
Length:372
Mass (Da):40,401
Last modified:June 16, 2009 - v1
Checksum:iC6D24DCCE03F5EEE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001612 Genomic DNA. Translation: ACP53567.1.
RefSeqiWP_012719767.1. NC_012633.1.
YP_002845310.1. NC_012633.1.

Genome annotation databases

EnsemblBacteriaiACP53567; ACP53567; RAF_ORF0675.
KEGGiraf:RAF_ORF0675.
PATRICi17873375. VBIRicAfr6986_0818.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001612 Genomic DNA. Translation: ACP53567.1.
RefSeqiWP_012719767.1. NC_012633.1.
YP_002845310.1. NC_012633.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
4IXOX-ray2.20A/B1-372[»]
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi347255.RAF_ORF0675.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACP53567; ACP53567; RAF_ORF0675.
KEGGiraf:RAF_ORF0675.
PATRICi17873375. VBIRicAfr6986_0818.

Phylogenomic databases

eggNOGiCOG1104.
HOGENOMiHOG000017510.
KOiK04487.
OMAiTKRDHET.
OrthoDBiEOG62RSBK.

Enzyme and pathway databases

BioCyciRAFR347255:GJCT-633-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR000192. Aminotrans_V_dom.
IPR020578. Aminotrans_V_PyrdxlP_BS.
IPR016454. Cysteine_dSase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00266. Aminotran_5. 1 hit.
[Graphical view]
PIRSFiPIRSF005572. NifS. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00595. AA_TRANSFER_CLASS_5. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the Rickettsia africae genome reveals that virulence acquisition in Rickettsia species may be explained by genome reduction."
    Fournier P.-E., El Karkouri K., Leroy Q., Robert C., Giumelli B., Renesto P., Socolovschi C., Parola P., Audic S., Raoult D.
    BMC Genomics 10:166-166(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ESF-5Imported.
  2. "X-ray structure of NifS-like protein from Rickettsia africae ESF-5."
    Seattle Structural Genomics Center for Infectious Disease (SSGCID)
    Edwards T.E., Abendroth J., Sankaran B., Fox III D., Lorimer D.
    Submitted (JAN-2013) to the PDB data bank
    Cited for: X-RAY CRYSTALLOGRAPHY (2.20 ANGSTROMS).

Entry informationi

Entry nameiC3PNQ7_RICAE
AccessioniPrimary (citable) accession number: C3PNQ7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: April 29, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.