Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C3NX28 (C3NX28_VIBCJ) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:VCD_000714 EMBL ACQ62674.1
OrganismVibrio cholerae serotype O1 (strain MJ-1236) [Complete proteome] [HAMAP] EMBL ACQ62674.1
Taxonomic identifier593588 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length465 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
C3NX28 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: CC0B0B297F24E28C

FASTA46551,491
        10         20         30         40         50         60 
MKTFDPLSSY SPTHWRSEGD INTTAARRDW LTHVNDETTQ NLLQRDANVF LHQAMSTPCL 

        70         80         90        100        110        120 
APLASAAGCY LYDVSGKSYL DFHGNNVHQL GHGHPQVIEK ITEQMQTLPF APRRFTHETA 

       130        140        150        160        170        180 
IRCAEKLTEI AGGELNRVLF APGGTSVIGM ALKLARHITQ NFKVVSLWDA FHGASLDAIS 

       190        200        210        220        230        240 
VGGEACFRQG MGPLMAGVER IPPAITYRGA FPREDGSDVH YADYLEYVIE KEGGIGAFIA 

       250        260        270        280        290        300 
EAVRNTDVQV PSRAYWQRVR EICDKHNVLL IIDDIPNGMG RSGEWFTHQA FGIEPDILCI 

       310        320        330        340        350        360 
GKGLGAGLIP IAALLTKEKY NTAAQVSLGH YTHEKSPLGC AAALATIEVI EQHNLLAKVH 

       370        380        390        400        410        420 
ADSIYMRQRL SQMQQQFSLI GDVRGIGLLW GIELVIDRHT KQRAHDEAEA ILYHCLRHGL 

       430        440        450        460 
SFKVSQGNVI QLSPPLIISR QELDQALDIL YSALLAISQQ MNYSY 

« Hide

References

[1]"Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae."
Chun J., Grim C.J., Hasan N.A., Lee J.H., Choi S.Y., Haley B.J., Taviani E., Jeon Y.-S., Kim D.W., Lee J.-H., Brettin T.S., Bruce D.C., Challacombe J.F., Detter J.C., Han C.S., Munk A.C., Chertkov O., Meincke L. expand/collapse author list , Saunders E., Walters R.A., Huq A., Nair G.B., Colwell R.R.
Proc. Natl. Acad. Sci. U.S.A. 106:15442-15447(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MJ-1236.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001486 Genomic DNA. Translation: ACQ62674.1.
RefSeqYP_002876470.1. NC_012667.1.

3D structure databases

ProteinModelPortalC3NX28.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING593588.VCD_000714.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ62674; ACQ62674; VCD_000714.
GeneID7853859.
KEGGvcj:VCD_000714.
PATRIC20072589. VBIVibCho20143_0716.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0160.
HOGENOMHOG000020206.
KOK00823.
OMAIDHAHGA.
OrthoDBEOG6QVRHN.
ProtClustDBPRK06082.

Enzyme and pathway databases

BioCycVCHO593588:GI2R-3609-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERPTHR11986. PTHR11986. 1 hit.
PfamPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMSSF53383. SSF53383. 1 hit.
PROSITEPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3NX28_VIBCJ
AccessionPrimary (citable) accession number: C3NX28
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: April 16, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)