C3NRN6 (C3NRN6_VIBCJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Adenylosuccinate lyase EMBL ACQ61376.1
EC=4.3.2.2 EMBL ACQ61376.1

Gene names

Ordered Locus Names:

VCD_003216

Organism

Vibrio cholerae serotype O1 (strain MJ-1236) [Complete proteome] [HAMAP] EMBL ACQ61376.1

Taxonomic identifier

593588 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae › Vibrio cholerae O1

Protein attributes

Sequence length	456 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL ACQ61376.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	IMP biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity Inferred from electronic annotation. Source: EC N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3NRN6 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: 1B57F9A5A1FDD859	FASTA	456	51,335
	10 20 30 40 50 60 MELSALTAVS PVDGRYGSKT IALRSIFSEF GLLKYRTIVE IRWLQKLAAT AEIAEVPAFS 70 80 90 100 110 120 AEANQFLDAI AANFNEADAL RIKEIERTTN HDVKAVEYFL KEKVAAMPEL HAVNEFIHFA 130 140 150 160 170 180 CTSEDINNTS HALMLKEARD TVILPEIRNV IDAIRKLAEE YRDIPLLSRT HGQPASPSTM 190 200 210 220 230 240 GKEMANVAYR MERQYKQIAN VEILAKINGA VGNYNAHLSA YPTVDWHKFS EEFITESLGV 250 260 270 280 290 300 DWNPYTTQIE PHDYIAELFE AVARFNTILI DFDRDVWGYI ALGHFKQRTI AGEIGSSTMP 310 320 330 340 350 360 HKVNPIDFEN SEGNLGLANA VFTHLAQKLP ISRWQRDLTD STVLRNLGVG VGYAIIAYTS 370 380 390 400 410 420 TLKGISKLEV NRDALLAELD HNWEVLAEPI QTVMRRYGIE KPYEKLKELT RGKRVDGEAM 430 440 450 RQFIDGLALP AEEKTRLKAM TPASYIGYAI ELTDKL

References

[1]

"Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae." Chun J., Grim C.J., Hasan N.A., Lee J.H., Choi S.Y., Haley B.J., Taviani E., Jeon Y.-S., Kim D.W., Lee J.-H., Brettin T.S., Bruce D.C., Challacombe J.F., Detter J.C., Han C.S., Munk A.C., Chertkov O., Meincke L. , Saunders E., Walters R.A., Huq A., Nair G.B., Colwell R.R. Proc. Natl. Acad. Sci. U.S.A. 106:15442-15447(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MJ-1236.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001485 Genomic DNA. Translation: ACQ61376.1.
RefSeq	YP_002878946.1. NC_012668.1.
3D structure databases
ProteinModelPortal	C3NRN6.
SMR	C3NRN6. Positions 1-456.
ModBase	Search...
Protein-protein interaction databases
STRING	593588.VCD_003216.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACQ61376; ACQ61376; VCD_003216.
GeneID	7854806.
KEGG	vcj:VCD_003216.
PATRIC	20077833. VBIVibCho20143_3229.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0015.
HOGENOM	HOG000252916.
KO	K01756.
OMA	TQIEHYD.
ProtClustDB	PRK09285.
Family and domain databases
Gene3D	1.10.275.10. 1 hit.
InterPro	IPR013539. AdenyloSucc_lyase_C_pln. IPR024083. Fumarase/histidase_N. IPR000362. Fumarate_lyase. IPR020557. Fumarate_lyase_CS. IPR022761. Fumarate_lyase_N. IPR008948. L-Aspartase-like. IPR004769. Pur_lyase. [Graphical view]
PANTHER	PTHR11444:SF2. PTHR11444:SF2. 1 hit.
Pfam	PF08328. ASL_C. 1 hit. PF00206. Lyase_1. 1 hit. [Graphical view]
PRINTS	PR00149. FUMRATELYASE.
SUPFAM	SSF48557. L-Aspartase-like. 1 hit.
TIGRFAMs	TIGR00928. purB. 1 hit.
PROSITE	PS00163. FUMARATE_LYASES. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3NRN6_VIBCJ

Accession

Primary (citable) accession number: C3NRN6

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)