C3NPP4 (C3NPP4_VIBCJ) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Sialidase EMBL ACQ60753.1
EC=3.2.1.18 EMBL ACQ60753.1

Gene names

Ordered Locus Names:

VCD_002587

Organism

Vibrio cholerae serotype O1 (strain MJ-1236) [Complete proteome] [HAMAP] EMBL ACQ60753.1

Taxonomic identifier

593588 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae › Vibrio cholerae O1

Protein attributes

Sequence length	781 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Glycosidase EMBL ACQ60753.1 Hydrolase
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	exo-alpha-(2->3)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->6)-sialidase activity Inferred from electronic annotation. Source: EC exo-alpha-(2->8)-sialidase activity Inferred from electronic annotation. Source: EC sialic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3NPP4 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: FA85ED907FB20AF0	FASTA	781	85,609
	10 20 30 40 50 60 MRFKNVKKTA LMLAMFGMAT SSNAALFDYN ATGDTEFDSP AKQGWMQDNT NNGSGVLTNA 70 80 90 100 110 120 DGMPAWLVQG IGGRAQWTYS LSTNQHAQAS SFGWRMTTEM KVLSGGMITN YYANGTQRVL 130 140 150 160 170 180 PIISLDSSGN LVVEFEGQTG RTVLATGTAA TEYHKFELVF LPGSNPSASF YFDGKLIRDN 190 200 210 220 230 240 IQPTASKQNM IVWGNGSSNT DGVAAYRDIK FEIQGDVIFR GPDRIPSIVA SSVTPGVVTA 250 260 270 280 290 300 FAEKRVGGGD PGALSNTNDI ITRTSRDGGI TWDTELNLTE QINVSDEFDF SDPRPIYDPS 310 320 330 340 350 360 SNTVLVSYAR WPTDAAQNGD RIKPWMPNGI FYSVYDVASG NWQAPIDVTD QVKERSFQIA 370 380 390 400 410 420 GWGGSELYRR NTSLNSQQDW QSNAKIRIVD GAANQIQVAD GSRKYVVTLS IDESGGLVAN 430 440 450 460 470 480 LNGVSAPIIL QSEHAKVHSF HDYELQYSAL NHTTTLFVDG QQITTWAGEV SQENNIQFGN 490 500 510 520 530 540 ADAQIDGRLH VQKIVLTQQG HNLVEFDAFY LAQQTPEVEK DLEKLGWTKI KTGNTMSLYG 550 560 570 580 590 600 NASVNPGPGH GITLTRQQNI SGSQNGRLIY PAIVLDRFFL NVMSIYSDDG GSNWQTGSTL 610 620 630 640 650 660 PIPFRWKSSS ILETLEPSEA DMVELQNGDL LLTARLDFNQ IVNGVNYSPR QQFLSKDGGI 670 680 690 700 710 720 TWSLLEANNA NVFSNISTGT VDASITRFEQ SDGSHFLLFT NPQGNPAGTN GRQNLGLWFS 730 740 750 760 770 780 FDEGVTWKGP IQLVNGASAY SDIYQLDSEN AIVIVETDNS NMRILRMPIT LLKQKLTLSQ N

References

[1]

"Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae." Chun J., Grim C.J., Hasan N.A., Lee J.H., Choi S.Y., Haley B.J., Taviani E., Jeon Y.-S., Kim D.W., Lee J.-H., Brettin T.S., Bruce D.C., Challacombe J.F., Detter J.C., Han C.S., Munk A.C., Chertkov O., Meincke L. , Saunders E., Walters R.A., Huq A., Nair G.B., Colwell R.R. Proc. Natl. Acad. Sci. U.S.A. 106:15442-15447(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: MJ-1236.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001485 Genomic DNA. Translation: ACQ60753.1.
RefSeq	YP_002878323.1. NC_012668.1.
3D structure databases
ProteinModelPortal	C3NPP4.
SMR	C3NPP4. Positions 25-781.
ModBase	Search...
Protein-protein interaction databases
STRING	593588.VCD_002587.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACQ60753; ACQ60753; VCD_002587.
GeneID	7856268.
KEGG	vcj:VCD_002587.
PATRIC	20076574. VBIVibCho20143_2608.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG4409.
HOGENOM	HOG000218204.
KO	K01186.
ProtClustDB	CLSK794375.
Family and domain databases
Gene3D	2.120.10.10. 2 hits. 2.60.120.200. 2 hits.
InterPro	IPR008985. ConA-like_lec_gl_sf. IPR013320. ConA-like_subgrp. IPR026856. Sialidase_fam. IPR011040. Sialidases. IPR015344. VCNA_lectin-like_dom. [Graphical view]
PANTHER	PTHR10628. PTHR10628. 1 hit.
Pfam	PF09264. Sial-lect-inser. 2 hits. [Graphical view]
SUPFAM	SSF49899. ConA_like_lec_gl. 2 hits. SSF50939. Sialidase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3NPP4_VIBCJ

Accession

Primary (citable) accession number: C3NPP4

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)