Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C3NNU1 (C3NNU1_VIBCJ) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Succinyl-CoA ligase [ADP-forming] subunit alpha RuleBase RU000699

EC=6.2.1.5 RuleBase RU000699
Gene names
Ordered Locus Names:VCD_002283 EMBL ACQ60450.1
OrganismVibrio cholerae serotype O1 (strain MJ-1236) [Complete proteome] [HAMAP] EMBL ACQ60450.1
Taxonomic identifier593588 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + succinate + CoA = ADP + phosphate + succinyl-CoA.

Subunit structure

Heterotetramer of two alpha and two beta subunits By similarity.

Sequence similarities

Belongs to the succinate/malate CoA ligase alpha subunit family. RuleBase RU000677

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site2471Tele-phosphohistidine intermediate By similarity PIRSR PIRSR001553-1

Sequences

Sequence LengthMass (Da)Tools
C3NNU1 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 7573EBE60C271086

FASTA29029,941
        10         20         30         40         50         60 
MSILINKDTK VICQGFTGGQ GTFHSEQAIA YGTQMVGGVS PGKGGTTHLG LPVFNTVREA 

        70         80         90        100        110        120 
VEVTGATATV IYVPAPFCKD AILEAIDAGI KLIVTITEGI PTTDMIDVKV KLEQTGVRMI 

       130        140        150        160        170        180 
GPNCPGVITP DECKIGIMPG HIHKKGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG 

       190        200        210        220        230        240 
DPIPGSNFID ILKMFQEDPA TEAIVMIGEI GGTAEEEAAA FIKANVTKPV VSYIAGVTAP 

       250        260        270        280        290 
PGKRMGHAGA IISGGKGTAE EKFAALESAG VKTVKSLADI GKALREVTGW 

« Hide

References

[1]"Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae."
Chun J., Grim C.J., Hasan N.A., Lee J.H., Choi S.Y., Haley B.J., Taviani E., Jeon Y.-S., Kim D.W., Lee J.-H., Brettin T.S., Bruce D.C., Challacombe J.F., Detter J.C., Han C.S., Munk A.C., Chertkov O., Meincke L. expand/collapse author list , Saunders E., Walters R.A., Huq A., Nair G.B., Colwell R.R.
Proc. Natl. Acad. Sci. U.S.A. 106:15442-15447(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MJ-1236.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001485 Genomic DNA. Translation: ACQ60450.1.
RefSeqYP_002878020.1. NC_012668.1.

3D structure databases

ProteinModelPortalC3NNU1.
SMRC3NNU1. Positions 2-287.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING593588.VCD_002283.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ60450; ACQ60450; VCD_002283.
GeneID7856077.
KEGGvcj:VCD_002283.
PATRIC20075969. VBIVibCho20143_2309.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0074.
HOGENOMHOG000239685.
KOK01902.
OMAHNSGPKA.
OrthoDBEOG644ZT0.
ProtClustDBPRK05678.

Enzyme and pathway databases

BioCycVCHO593588:GI2R-1352-MONOMER.

Family and domain databases

Gene3D3.40.50.261. 1 hit.
3.40.50.720. 1 hit.
InterProIPR017440. Cit_synth/succinyl-CoA_lig_AS.
IPR003781. CoA-bd.
IPR005810. CoA_lig_alpha.
IPR005811. CoA_ligase.
IPR016040. NAD(P)-bd_dom.
IPR016102. Succinyl-CoA_synth-like.
[Graphical view]
PfamPF02629. CoA_binding. 1 hit.
PF00549. Ligase_CoA. 1 hit.
[Graphical view]
PIRSFPIRSF001553. SucCS_alpha. 1 hit.
PRINTSPR01798. SCOASYNTHASE.
SMARTSM00881. CoA_binding. 1 hit.
[Graphical view]
SUPFAMSSF52210. SSF52210. 1 hit.
TIGRFAMsTIGR01019. sucCoAalpha. 1 hit.
PROSITEPS01216. SUCCINYL_COA_LIG_1. 1 hit.
PS00399. SUCCINYL_COA_LIG_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3NNU1_VIBCJ
AccessionPrimary (citable) accession number: C3NNU1
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: November 13, 2013
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)