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C3MSA7 (C3MSA7_SULIM) Unreviewed, UniProtKB/TrEMBL

Last modified November 16, 2011. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.2.1.31 EMBL ACP39050.1
Gene names
Ordered Locus Names:M1425_2319
OrganismSulfolobus islandicus (strain M.14.25 / Kamchatka #1) [Complete proteome] [HAMAP]
Taxonomic identifier427317 [NCBI]
Taxonomic lineageArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus

Protein attributes

Sequence length569 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C3MSA7 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: D18FB2F7C190D053

FASTA56966,736
        10         20         30         40         50         60 
MRSFYRPKID LQGFWKFKID SENVGEKNEW GKGLESEDII YVPASWNEQN PQWDQFSSIA 

        70         80         90        100        110        120 
WYQKDLFVSS YESKKAWIVF EGAGYITKLW INGEYVGTHE GSFTQFKFPI KLNTNEFNKI 

       130        140        150        160        170        180 
VVKIDNTPSP YNLPPAKDLN IAAFDFFNYG GIQRPVYIEF VDECHVEDIT VYTKSNGHLK 

       190        200        210        220        230        240 
VEILPECNQK YSLRFKLVDK EGKVLLDEES SNEIYEKDVG NVTPWSSDNP YLYTLIVEIY 

       250        260        270        280        290        300 
VDENLKDSIY ERIGFRDVEV KNGRIYLNRK PIFLKGFGRH EDFPILGKFM YGAVLVRDFY 

       310        320        330        340        350        360 
LMRKIGANSF RTSHYPYSNE HLDLADEMGF LVILEPPLCY SNISRVMSQE EIAKMFSDIK 

       370        380        390        400        410        420 
YFEKVKHTIK EMIRQHKNRP SVIMYSVMNE PPSDMREVAE FIKKEVEFLK TLDSSRPVTF 

       430        440        450        460        470        480 
ASHRSVRDLA LEYVDVISLN YYHGWYTEWG DIDSGVKIVA MELEEIHKKF PEKPIIITEF 

       490        500        510        520        530        540 
GADAIYGLHS DPPQMWSEEY QSEMIRKYIE TLRMNSYIVG FHIWNFADFR TPQNPGRTIL 

       550        560 
NRKGIFTRDR QPKSAAKVVE ELFKNKLPS 

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References

[1]"Biogeography of the Sulfolobus islandicus pan-genome."
Reno M.L., Held N.L., Fields C.J., Burke P.V., Whitaker R.J.
Proc. Natl. Acad. Sci. U.S.A. 106:8605-8610(2009) [PubMed: 19435847] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001400 Genomic DNA. Translation: ACP39050.1.
RefSeqYP_002830348.1. NC_012588.1.

3D structure databases

ProteinModelPortalC3MSA7.
ModBaseSearch...

Protein-protein interaction databases

STRINGC3MSA7.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7794439.
GenomeReviewsGene locus M1425_2319 in contig CP001400_GR.
KEGGsia:M1425_2319.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAIADVFIN.
ProtClustDBCLSK883868.

Family and domain databases

InterProIPR008979. Galactose-bd-like.
IPR006101. Glyco_hydro_2.
IPR013812. Glyco_hydro_2/20_Ig-like.
IPR006102. Glyco_hydro_2_Ig-like.
IPR006104. Glyco_hydro_2_N.
IPR006103. Glyco_hydro_2_TIM.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:2.60.40.320. Glyco_hydro_2/20_Ig-like. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK01195.
PfamPF00703. Glyco_hydro_2. 1 hit.
PF02836. Glyco_hydro_2_C. 1 hit.
PF02837. Glyco_hydro_2_N. 1 hit.
[Graphical view]
PRINTSPR00132. GLHYDRLASE2.
SUPFAMSSF49785. Gal_bind_like. 1 hit.
SSF49303. Glyco_hydro_2Ig. 1 hit.
SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC3MSA7_SULIM
AccessionPrimary (citable) accession number: C3MSA7
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: November 16, 2011
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)