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C3MR78

- IF6_SULIL

UniProt

C3MR78 - IF6_SULIL

Protein

Translation initiation factor 6

Gene

eif6

Organism
Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 31 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

    GO - Molecular functioni

    1. ribosome binding Source: InterPro
    2. translation initiation factor activity Source: UniProtKB-KW

    GO - Biological processi

    1. mature ribosome assembly Source: InterPro

    Keywords - Molecular functioni

    Initiation factor

    Keywords - Biological processi

    Protein biosynthesis

    Enzyme and pathway databases

    BioCyciSISL429572:GHOW-1964-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Translation initiation factor 6UniRule annotation
    Short name:
    aIF-6UniRule annotation
    Gene namesi
    Name:eif6UniRule annotation
    Ordered Locus Names:LS215_1895
    OrganismiSulfolobus islandicus (strain L.S.2.15 / Lassen #1)
    Taxonomic identifieri429572 [NCBI]
    Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
    ProteomesiUP000001747: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 223223Translation initiation factor 6PRO_1000202009Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi429572.LS215_1895.

    Structurei

    3D structure databases

    ProteinModelPortaliC3MR78.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the eIF-6 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG1976.
    HOGENOMiHOG000230604.
    KOiK03264.
    OMAiNDWCAFT.

    Family and domain databases

    HAMAPiMF_00032. eIF_6.
    InterProiIPR002769. eIF6.
    [Graphical view]
    PANTHERiPTHR10784. PTHR10784. 1 hit.
    PfamiPF01912. eIF-6. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006413. IF-6. 1 hit.
    SMARTiSM00654. eIF6. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR00323. eIF-6. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C3MR78-1 [UniParc]FASTAAdd to Basket

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    MNLQRLSIFG TDNIGVYIYT NNKYTVVPRG LDSETKENIV QILGTELIEA    50
    EISRSFLLGI FISGNDNGIL LPKSTIDDEF RFLKENLRDC RVEVLNSKVT 100
    ALGNTILTNN KAALIYPEFN DIEEKIIKET LGVEEIRRGK IAQMITVGSV 150
    GVVTNKGGLV HVDTSEKELK ELEKLFSVKI DIGTVNFGSV FIRSGLVAND 200
    KGTLVGASTT GPEILRIQKA LGE 223
    Length:223
    Mass (Da):24,503
    Last modified:June 16, 2009 - v1
    Checksum:iEFA799EBF0764E0A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001399 Genomic DNA. Translation: ACP35891.1.
    RefSeqiYP_002832536.1. NC_012589.1.

    Genome annotation databases

    EnsemblBacteriaiACP35891; ACP35891; LS215_1895.
    GeneIDi7799538.
    KEGGisis:LS215_1895.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001399 Genomic DNA. Translation: ACP35891.1 .
    RefSeqi YP_002832536.1. NC_012589.1.

    3D structure databases

    ProteinModelPortali C3MR78.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 429572.LS215_1895.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACP35891 ; ACP35891 ; LS215_1895 .
    GeneIDi 7799538.
    KEGGi sis:LS215_1895.

    Phylogenomic databases

    eggNOGi COG1976.
    HOGENOMi HOG000230604.
    KOi K03264.
    OMAi NDWCAFT.

    Enzyme and pathway databases

    BioCyci SISL429572:GHOW-1964-MONOMER.

    Family and domain databases

    HAMAPi MF_00032. eIF_6.
    InterProi IPR002769. eIF6.
    [Graphical view ]
    PANTHERi PTHR10784. PTHR10784. 1 hit.
    Pfami PF01912. eIF-6. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006413. IF-6. 1 hit.
    SMARTi SM00654. eIF6. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR00323. eIF-6. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: L.S.2.15 / Lassen #1.

    Entry informationi

    Entry nameiIF6_SULIL
    AccessioniPrimary (citable) accession number: C3MR78
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 22, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 31 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Translation initiation factors
      List of translation initiation factor entries
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3