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C3MR78

- IF6_SULIL

UniProt

C3MR78 - IF6_SULIL

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Protein

Translation initiation factor 6

Gene

eif6

Organism
Sulfolobus islandicus (strain L.S.2.15 / Lassen #1)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex.UniRule annotation

GO - Molecular functioni

  1. ribosome binding Source: InterPro
  2. translation initiation factor activity Source: UniProtKB-KW

GO - Biological processi

  1. mature ribosome assembly Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Initiation factor

Keywords - Biological processi

Protein biosynthesis

Enzyme and pathway databases

BioCyciSISL429572:GHOW-1964-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Translation initiation factor 6UniRule annotation
Short name:
aIF-6UniRule annotation
Gene namesi
Name:eif6UniRule annotation
Ordered Locus Names:LS215_1895
OrganismiSulfolobus islandicus (strain L.S.2.15 / Lassen #1)
Taxonomic identifieri429572 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiSulfolobalesSulfolobaceaeSulfolobus
ProteomesiUP000001747: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 223223Translation initiation factor 6PRO_1000202009Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi429572.LS215_1895.

Structurei

3D structure databases

ProteinModelPortaliC3MR78.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the eIF-6 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1976.
HOGENOMiHOG000230604.
KOiK03264.
OMAiNDWCAFT.

Family and domain databases

HAMAPiMF_00032. eIF_6.
InterProiIPR002769. eIF6.
[Graphical view]
PANTHERiPTHR10784. PTHR10784. 1 hit.
PfamiPF01912. eIF-6. 1 hit.
[Graphical view]
PIRSFiPIRSF006413. IF-6. 1 hit.
SMARTiSM00654. eIF6. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00323. eIF-6. 1 hit.

Sequencei

Sequence statusi: Complete.

C3MR78-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNLQRLSIFG TDNIGVYIYT NNKYTVVPRG LDSETKENIV QILGTELIEA
60 70 80 90 100
EISRSFLLGI FISGNDNGIL LPKSTIDDEF RFLKENLRDC RVEVLNSKVT
110 120 130 140 150
ALGNTILTNN KAALIYPEFN DIEEKIIKET LGVEEIRRGK IAQMITVGSV
160 170 180 190 200
GVVTNKGGLV HVDTSEKELK ELEKLFSVKI DIGTVNFGSV FIRSGLVAND
210 220
KGTLVGASTT GPEILRIQKA LGE
Length:223
Mass (Da):24,503
Last modified:June 16, 2009 - v1
Checksum:iEFA799EBF0764E0A
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001399 Genomic DNA. Translation: ACP35891.1.
RefSeqiWP_012713966.1. NC_012589.1.
YP_002832536.1. NC_012589.1.

Genome annotation databases

EnsemblBacteriaiACP35891; ACP35891; LS215_1895.
GeneIDi7799538.
KEGGisis:LS215_1895.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001399 Genomic DNA. Translation: ACP35891.1 .
RefSeqi WP_012713966.1. NC_012589.1.
YP_002832536.1. NC_012589.1.

3D structure databases

ProteinModelPortali C3MR78.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 429572.LS215_1895.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACP35891 ; ACP35891 ; LS215_1895 .
GeneIDi 7799538.
KEGGi sis:LS215_1895.

Phylogenomic databases

eggNOGi COG1976.
HOGENOMi HOG000230604.
KOi K03264.
OMAi NDWCAFT.

Enzyme and pathway databases

BioCyci SISL429572:GHOW-1964-MONOMER.

Family and domain databases

HAMAPi MF_00032. eIF_6.
InterProi IPR002769. eIF6.
[Graphical view ]
PANTHERi PTHR10784. PTHR10784. 1 hit.
Pfami PF01912. eIF-6. 1 hit.
[Graphical view ]
PIRSFi PIRSF006413. IF-6. 1 hit.
SMARTi SM00654. eIF6. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR00323. eIF-6. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: L.S.2.15 / Lassen #1.

Entry informationi

Entry nameiIF6_SULIL
AccessioniPrimary (citable) accession number: C3MR78
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 22, 2009
Last sequence update: June 16, 2009
Last modified: October 29, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Translation initiation factors
    List of translation initiation factor entries
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3