C3MJ23 (C3MJ23_SULIL) Unreviewed, UniProtKB/TrEMBL
Last modified
January 25, 2012.
Version 16.
History...
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Porphobilinogen synthase EMBL ACP36110.1 EC=4.2.1.24 EMBL ACP36110.1 | ||
| Gene names |
| ||
| Organism | Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) [Complete proteome] [HAMAP] EMBL ACP36110.1 | ||
| Taxonomic identifier | 429572 [NCBI] | ||
| Taxonomic lineage | Archaea › Crenarchaeota › Thermoprotei › Sulfolobales › Sulfolobaceae › Sulfolobus |
Protein attributes
| Sequence length | 336 AA. |
| Sequence status | Complete. |
| Protein existence | Predicted |
Ontologies
| Keywords | |
|---|---|
| Ligand | Magnesium PIRSR PIRSR001415-5 Metal-binding PIRSR PIRSR001415-5 |
| Molecular function | Lyase EMBL ACP36110.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | porphyrin-containing compound biosynthetic process Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | metal ion binding Inferred from electronic annotation. Source: UniProtKB-KW porphobilinogen synthase activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Sites | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Active site | 202 | 1 | Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1 | ||||||
| Active site | 255 | 1 | Schiff-base intermediate with substrate By similarity PIRSR PIRSR001415-1 | ||||||
| Metal binding | 240 | 1 | Magnesium By similarity PIRSR PIRSR001415-5 | ||||||
| Binding site | 212 | 1 | Substrate 1 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 224 | 1 | Substrate 1 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 282 | 1 | Substrate 2 By similarity PIRSR PIRSR001415-2 | ||||||
| Binding site | 321 | 1 | Substrate 2 By similarity PIRSR PIRSR001415-2 | ||||||
Sequences
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References
| [1] | "Biogeography of the Sulfolobus islandicus pan-genome." Reno M.L., Held N.L., Fields C.J., Burke P.V., Whitaker R.J. Proc. Natl. Acad. Sci. U.S.A. 106:8605-8610(2009) [PubMed: 19435847] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: L.S.2.15 EMBL ACP36110.1. |
| [2] | US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Sims D.R., Brettin T., Bruce D., Detter J.C., Han C., Kuske C.R., Schmutz J., Larimer F., Land M., Hauser L. Richardson P.Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: L.S.2.15 EMBL ACP36110.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001399 Genomic DNA. Translation: ACP36110.1. |
| RefSeq | YP_002832755.1. NC_012589.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C3MJ23. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 7798092. |
| GenomeReviews | Gene locus LS215_2117 in contig CP001399_GR. |
| KEGG | sis:LS215_2117. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | HCGVVEN. |
| ProtClustDB | PRK09283. |
Family and domain databases | |
| InterPro | IPR013785. Aldolase_TIM. IPR001731. Porphobilinogen_synth. [Graphical view] |
| Gene3D | G3DSA:3.20.20.70. Aldolase_TIM. 1 hit. |
| KO | K01698. |
| PANTHER | PTHR11458. AlaD_dehydratase. 1 hit. |
| Pfam | PF00490. ALAD. 1 hit. [Graphical view] |
| PIRSF | PIRSF001415. Porphbilin_synth. 1 hit. |
| PRINTS | PR00144. DALDHYDRTASE. |
| SMART | SM01004. ALAD. 1 hit. [Graphical view] |
| PROSITE | PS00169. D_ALA_DEHYDRATASE. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C3MJ23_SULIL | ||||||||
| Accession | Primary (citable) accession number: C3MJ23 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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