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C3MIG9 (C3MIG9_RHISN) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:NGR_c27850 EMBL ACP26532.1
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP] EMBL ACP26532.1
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length865 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C3MIG9 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: E0F5109E6807A32A

FASTA86594,806
        10         20         30         40         50         60 
MAARSAPLSE YNRRRDFTKT REPKGAVAPA SGDRKRFLVQ KHDATRLHYD FRLEWEGVLK 

        70         80         90        100        110        120 
SWAVTRGPSL NPEDKRLAIR TEDHPLAYGD FEGTIPEGEY GGGTVMLWDT GWWEPEGDPS 

       130        140        150        160        170        180 
KGLKKGKLSF RLHGSRMKGG WALVRMRPRD GEKRENWLLV KETDEIASEE GESLIKENVT 

       190        200        210        220        230        240 
SVATGRTMDE IAGGKGEKRA RVWHSNKSTA ANLKAGAIAG NDNPRKRQAR KSSGKLPAFK 

       250        260        270        280        290        300 
APQLATLVTK APAGETWLNE AKFDGYRLIC AIGGGAVRCY TRNGLDWTEK FPAIAAALAE 

       310        320        330        340        350        360 
LDCKSALIDG EVVALSDAGS SFSALQKALK TGASTRLYAF DLIELDGKDL GRAPLIDRKE 

       370        380        390        400        410        420 
KLRGLLDSLG TTATVQYSEH VQGNGEHVLA AICKAGQEGI IAKEAKAPYR SGRTRSWLKV 

       430        440        450        460        470        480 
KCTKRQEFVI GGYTPSSKKG RPFASILVGT FEGGKLIYRG GVGTGFGEKV MEELAAAFAK 

       490        500        510        520        530        540 
RSRETPPFDS VPRERMRKAV WLKPDLVAEV DFAEFTADGH VRHGSFEGLR EDKEAKAVKL 

       550        560        570        580        590        600 
ETAKPTGAAS KAAKGKPSAN TGKASSPKGD TDVLGVQISH PDRILFEGQG ITKIDLARYY 

       610        620        630        640        650        660 
AVVADRMLTF AADHPVSLVR CPQGGQRHCF FQKHTNDAFP EAIREVPITE SSGETENYMY 

       670        680        690        700        710        720 
VHDAKGLVAA VQMGTLEFHI WGATIDKLET PDRLVFDFDP DPSVDFTTVK NAARALRDEL 

       730        740        750        760        770        780 
ADIGLQSFAL VTGGKGVHVV VPLVRRASWD DAKSFAKAVA QNIADRDPDH FVATMSKAKR 

       790        800        810        820        830        840 
KGRIFIDWLR NERGATAIAP YSSRAREGGP IATPVGWDEL ERLSGANTFR IGDILERIEA 

       850        860 
DTDPWRDIGK VKQSLTKKMM DSVIK 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001389 Genomic DNA. Translation: ACP26532.1.
RefSeqYP_002827285.1. NC_012587.1.

3D structure databases

ProteinModelPortalC3MIG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_c27850.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP26532; ACP26532; NGR_c27850.
GeneID7790439.
KEGGrhi:NGR_c27850.
PATRIC32312061. VBIRhiSp122450_5620.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
HOGENOMHOG000222509.
KOK01971.
OMAWLKVKCT.
OrthoDBEOG661H49.
ProtClustDBCLSK2484757.

Enzyme and pathway databases

BioCycSFRE394:GBYN-2776-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3MIG9_RHISN
AccessionPrimary (citable) accession number: C3MIG9
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: February 19, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)