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C3LW14

- GLPB_VIBCM

UniProt

C3LW14 - GLPB_VIBCM

Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

    Catalytic activityi

    sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

    Cofactori

    FMN.UniRule annotation

    Pathwayi

    GO - Molecular functioni

    1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

    GO - Biological processi

    1. glycerol catabolic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Flavoprotein, FMN

    Enzyme and pathway databases

    BioCyciVCHO579112:GJAW-3474-MONOMER.
    UniPathwayiUPA00618; UER00673.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
    Short name:
    Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
    Short name:
    Anaerobic G3Pdhase BUniRule annotation
    Gene namesi
    Name:glpBUniRule annotation
    Ordered Locus Names:VCM66_A0707
    OrganismiVibrio cholerae serotype O1 (strain M66-2)
    Taxonomic identifieri579112 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000001217: Chromosome II

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 436436Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_1000148361Add
    BLAST

    Interactioni

    Subunit structurei

    Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

    Protein-protein interaction databases

    STRINGi579112.VCM66_A0707.

    Structurei

    3D structure databases

    ProteinModelPortaliC3LW14.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3075.
    HOGENOMiHOG000278489.
    KOiK00112.
    OMAiFRSVNIS.
    OrthoDBiEOG6K6V62.

    Family and domain databases

    HAMAPiMF_00753. Glycerol3P_GlpB.
    InterProiIPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view]
    PfamiPF00890. FAD_binding_2. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    C3LW14-1 [UniParc]FASTAAdd to Basket

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    MMHYDVAVIG GGIAGYSAAL RALQAGKKVV LINQGQSALH FSSGSIDVLG    50
    RLPDGSVVNQ PFDALSALQQ QVPEHPYSKV GRKNSEKGLM WFKRTLDSAH 100
    VPLHHEPDGA NHWRITPLGT LKNTWLSQPF VYPYRGNADF SRIMIVAIDG 150
    YRDFQPAMLR DNLAQRPELA NTPMLTVNVS IPGFEGFRRN PNELRSIDIA 200
    RLLRQESAWN ALCDQLMRVA RPDDLVIMPA IMGNGDGLHL MSKLQQVTQL 250
    RFHEVPTMPP SLLGIRIEEA LHRSFIQGGG VQLKGDKVID GDFAGSRLTA 300
    IHTQNLRDFP ISAEHYVMAT GSYFSQGLQA SQHAIQEPTF ALDVQQNPDR 350
    AQWRHAQFIA AQSHPFMTFG VTTDANLHPS RQGKTIDNLW CCGAMLSGYD 400
    PVFEGCGGGV AIATAYHAVE QILATYAQTK QPEVLL 436
    Length:436
    Mass (Da):48,094
    Last modified:June 16, 2009 - v1
    Checksum:i9AB04D632D15CDD8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07669.1.
    RefSeqiYP_002812326.1. NC_012580.1.

    Genome annotation databases

    EnsemblBacteriaiACP07669; ACP07669; VCM66_A0707.
    GeneIDi7780932.
    KEGGivcm:VCM66_A0707.
    PATRICi20070467. VBIVibCho108967_3242.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07669.1 .
    RefSeqi YP_002812326.1. NC_012580.1.

    3D structure databases

    ProteinModelPortali C3LW14.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 579112.VCM66_A0707.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACP07669 ; ACP07669 ; VCM66_A0707 .
    GeneIDi 7780932.
    KEGGi vcm:VCM66_A0707.
    PATRICi 20070467. VBIVibCho108967_3242.

    Phylogenomic databases

    eggNOGi COG3075.
    HOGENOMi HOG000278489.
    KOi K00112.
    OMAi FRSVNIS.
    OrthoDBi EOG6K6V62.

    Enzyme and pathway databases

    UniPathwayi UPA00618 ; UER00673 .
    BioCyci VCHO579112:GJAW-3474-MONOMER.

    Family and domain databases

    HAMAPi MF_00753. Glycerol3P_GlpB.
    InterProi IPR003953. FAD_bind_dom.
    IPR009158. G3P_DH_GlpB_su.
    [Graphical view ]
    Pfami PF00890. FAD_binding_2. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
    TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
      Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
      PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M66-2.

    Entry informationi

    Entry nameiGLPB_VIBCM
    AccessioniPrimary (citable) accession number: C3LW14
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 28, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3