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C3LW14

- GLPB_VIBCM

UniProt

C3LW14 - GLPB_VIBCM

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Protein

Anaerobic glycerol-3-phosphate dehydrogenase subunit B

Gene

glpB

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.UniRule annotation

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FMN.UniRule annotation

Pathwayi

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol catabolic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Flavoprotein, FMN

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-3474-MONOMER.
UniPathwayiUPA00618; UER00673.

Names & Taxonomyi

Protein namesi
Recommended name:
Anaerobic glycerol-3-phosphate dehydrogenase subunit BUniRule annotation (EC:1.1.5.3UniRule annotation)
Short name:
Anaerobic G-3-P dehydrogenase subunit BUniRule annotation
Short name:
Anaerobic G3Pdhase BUniRule annotation
Gene namesi
Name:glpBUniRule annotation
Ordered Locus Names:VCM66_A0707
OrganismiVibrio cholerae serotype O1 (strain M66-2)
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome II

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 436436Anaerobic glycerol-3-phosphate dehydrogenase subunit BPRO_1000148361Add
BLAST

Interactioni

Subunit structurei

Composed of a catalytic GlpA/B dimer and of membrane bound GlpC.UniRule annotation

Protein-protein interaction databases

STRINGi579112.VCM66_A0707.

Structurei

3D structure databases

ProteinModelPortaliC3LW14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the anaerobic G-3-P dehydrogenase subunit B family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3075.
HOGENOMiHOG000278489.
KOiK00112.
OMAiFRSVNIS.
OrthoDBiEOG6K6V62.

Family and domain databases

HAMAPiMF_00753. Glycerol3P_GlpB.
InterProiIPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view]
PfamiPF00890. FAD_binding_2. 1 hit.
[Graphical view]
PIRSFiPIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsiTIGR03378. glycerol3P_GlpB. 1 hit.

Sequencei

Sequence statusi: Complete.

C3LW14-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MMHYDVAVIG GGIAGYSAAL RALQAGKKVV LINQGQSALH FSSGSIDVLG
60 70 80 90 100
RLPDGSVVNQ PFDALSALQQ QVPEHPYSKV GRKNSEKGLM WFKRTLDSAH
110 120 130 140 150
VPLHHEPDGA NHWRITPLGT LKNTWLSQPF VYPYRGNADF SRIMIVAIDG
160 170 180 190 200
YRDFQPAMLR DNLAQRPELA NTPMLTVNVS IPGFEGFRRN PNELRSIDIA
210 220 230 240 250
RLLRQESAWN ALCDQLMRVA RPDDLVIMPA IMGNGDGLHL MSKLQQVTQL
260 270 280 290 300
RFHEVPTMPP SLLGIRIEEA LHRSFIQGGG VQLKGDKVID GDFAGSRLTA
310 320 330 340 350
IHTQNLRDFP ISAEHYVMAT GSYFSQGLQA SQHAIQEPTF ALDVQQNPDR
360 370 380 390 400
AQWRHAQFIA AQSHPFMTFG VTTDANLHPS RQGKTIDNLW CCGAMLSGYD
410 420 430
PVFEGCGGGV AIATAYHAVE QILATYAQTK QPEVLL
Length:436
Mass (Da):48,094
Last modified:June 16, 2009 - v1
Checksum:i9AB04D632D15CDD8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001234 Genomic DNA. Translation: ACP07669.1.
RefSeqiYP_002812326.1. NC_012580.1.

Genome annotation databases

EnsemblBacteriaiACP07669; ACP07669; VCM66_A0707.
GeneIDi7780932.
KEGGivcm:VCM66_A0707.
PATRICi20070467. VBIVibCho108967_3242.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001234 Genomic DNA. Translation: ACP07669.1 .
RefSeqi YP_002812326.1. NC_012580.1.

3D structure databases

ProteinModelPortali C3LW14.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 579112.VCM66_A0707.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACP07669 ; ACP07669 ; VCM66_A0707 .
GeneIDi 7780932.
KEGGi vcm:VCM66_A0707.
PATRICi 20070467. VBIVibCho108967_3242.

Phylogenomic databases

eggNOGi COG3075.
HOGENOMi HOG000278489.
KOi K00112.
OMAi FRSVNIS.
OrthoDBi EOG6K6V62.

Enzyme and pathway databases

UniPathwayi UPA00618 ; UER00673 .
BioCyci VCHO579112:GJAW-3474-MONOMER.

Family and domain databases

HAMAPi MF_00753. Glycerol3P_GlpB.
InterProi IPR003953. FAD_bind_dom.
IPR009158. G3P_DH_GlpB_su.
[Graphical view ]
Pfami PF00890. FAD_binding_2. 1 hit.
[Graphical view ]
PIRSFi PIRSF000141. Anaerobic_G3P_dh. 1 hit.
TIGRFAMsi TIGR03378. glycerol3P_GlpB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2.

Entry informationi

Entry nameiGLPB_VIBCM
AccessioniPrimary (citable) accession number: C3LW14
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: June 16, 2009
Last modified: October 1, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3