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C3LVS2 (C3LVS2_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 30. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.1.5.3 EMBL ACP07577.1
Gene names
Name:glpD EMBL ACP07577.1
Ordered Locus Names:VCM66_A0615 EMBL ACP07577.1
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP] EMBL ACP07577.1
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

FAD By similarity. RuleBase RU003892

Sequence similarities

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.

Sequences

Sequence LengthMass (Da)Tools
C3LVS2 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 8D96FD5F78FC48B1

FASTA51257,693
        10         20         30         40         50         60 
MNARSTRFTQ DEVLDLIIVG GGINGAGIAA DATGRGLKVG LYDAKDFASA TSSASSKLVH 

        70         80         90        100        110        120 
GGLRYLEHYE FRLVSEALAE REVLLKKAPH IVTPMRFRLP HRPFLRPAWM IRAGLFLYDN 

       130        140        150        160        170        180 
LGKRTSLPAS HKVNLKAGSV TKPEMQIGFE YSDCWVDDAR LVILNAMQAQ EQGAEVLNYC 

       190        200        210        220        230        240 
TVEKAERMGD LWHVTLLDEQ TQQRFERRSH ALVNAAGPWV KQFLNENAHV SSPYGIRLIQ 

       250        260        270        280        290        300 
GSHIIVPRIH DEPQAYILQN EDKRIVFVIP YLDDYSMIGT TDVEYKGDPR KVAITDAERD 

       310        320        330        340        350        360 
YLISIVNKHF MREIARSDII AEFSGVRPLC DDESNSPQAI TRDYTLSLDQ QADEAPLLSI 

       370        380        390        400        410        420 
FGGKLTTYRK LGEAAMKHLA PFFPKMKAPW TADAPLPGGE NFDYAALKNQ LVAAFPFITE 

       430        440        450        460        470        480 
SVIERWLRSY GSRTTQLLAG VTGIEDLGIA FSGELYQREI DYLCEKEFAR HAQDIFWRRS 

       490        500        510 
KLGLNHDTSV VEEVESYLQQ KFHAEQPLKA TV 

« Hide

References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M66-2 EMBL ACP07577.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001234 Genomic DNA. Translation: ACP07577.1.
RefSeqYP_002812234.1. NC_012580.1.

3D structure databases

ProteinModelPortalC3LVS2.
SMRC3LVS2. Positions 12-499.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579112.VCM66_A0615.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP07577; ACP07577; VCM66_A0615.
GeneID7780840.
KEGGvcm:VCM66_A0615.
PATRIC20070293. VBIVibCho108967_3155.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0578.
HOGENOMHOG000004811.
KOK00111.
OMAPVDQQEQ.
OrthoDBEOG651SR7.
ProtClustDBPRK12266.

Enzyme and pathway databases

BioCycVCHO579112:GJAW-3382-MONOMER.

Family and domain databases

InterProIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamPF01266. DAO. 1 hit.
[Graphical view]
PRINTSPR01001. FADG3PDH.
PROSITEPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3LVS2_VIBCM
AccessionPrimary (citable) accession number: C3LVS2
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: November 13, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)