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Protein

Glycerol-3-phosphate dehydrogenase

Gene

glpD

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

sn-glycerol 3-phosphate + a quinone = glycerone phosphate + a quinol.UniRule annotation

Cofactori

FADUniRule annotation

GO - Molecular functioni

  1. sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity Source: UniProtKB-EC

GO - Biological processi

  1. glycerol-3-phosphate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationSAAS annotation

Keywords - Ligandi

FlavoproteinUniRule annotation

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-3382-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycerol-3-phosphate dehydrogenaseUniRule annotation (EC:1.1.5.3UniRule annotation)
Gene namesi
Name:glpDImported
Ordered Locus Names:VCM66_A0615Imported
OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome II

Subcellular locationi

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi579112.VCM66_A0615.

Structurei

3D structure databases

ProteinModelPortaliC3LVS2.
SMRiC3LVS2. Positions 12-499.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0578.
HOGENOMiHOG000004811.
KOiK00111.
OMAiPVDQQEQ.
OrthoDBiEOG651SR7.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3LVS2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNARSTRFTQ DEVLDLIIVG GGINGAGIAA DATGRGLKVG LYDAKDFASA
60 70 80 90 100
TSSASSKLVH GGLRYLEHYE FRLVSEALAE REVLLKKAPH IVTPMRFRLP
110 120 130 140 150
HRPFLRPAWM IRAGLFLYDN LGKRTSLPAS HKVNLKAGSV TKPEMQIGFE
160 170 180 190 200
YSDCWVDDAR LVILNAMQAQ EQGAEVLNYC TVEKAERMGD LWHVTLLDEQ
210 220 230 240 250
TQQRFERRSH ALVNAAGPWV KQFLNENAHV SSPYGIRLIQ GSHIIVPRIH
260 270 280 290 300
DEPQAYILQN EDKRIVFVIP YLDDYSMIGT TDVEYKGDPR KVAITDAERD
310 320 330 340 350
YLISIVNKHF MREIARSDII AEFSGVRPLC DDESNSPQAI TRDYTLSLDQ
360 370 380 390 400
QADEAPLLSI FGGKLTTYRK LGEAAMKHLA PFFPKMKAPW TADAPLPGGE
410 420 430 440 450
NFDYAALKNQ LVAAFPFITE SVIERWLRSY GSRTTQLLAG VTGIEDLGIA
460 470 480 490 500
FSGELYQREI DYLCEKEFAR HAQDIFWRRS KLGLNHDTSV VEEVESYLQQ
510
KFHAEQPLKA TV
Length:512
Mass (Da):57,693
Last modified:June 16, 2009 - v1
Checksum:i8D96FD5F78FC48B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07577.1.
RefSeqiYP_002812234.1. NC_012580.1.

Genome annotation databases

EnsemblBacteriaiACP07577; ACP07577; VCM66_A0615.
GeneIDi7780840.
KEGGivcm:VCM66_A0615.
PATRICi20070293. VBIVibCho108967_3155.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07577.1.
RefSeqiYP_002812234.1. NC_012580.1.

3D structure databases

ProteinModelPortaliC3LVS2.
SMRiC3LVS2. Positions 12-499.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi579112.VCM66_A0615.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACP07577; ACP07577; VCM66_A0615.
GeneIDi7780840.
KEGGivcm:VCM66_A0615.
PATRICi20070293. VBIVibCho108967_3155.

Phylogenomic databases

eggNOGiCOG0578.
HOGENOMiHOG000004811.
KOiK00111.
OMAiPVDQQEQ.
OrthoDBiEOG651SR7.

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-3382-MONOMER.

Family and domain databases

InterProiIPR006076. FAD-dep_OxRdtase.
IPR000447. G3P_DH_FAD-dep.
[Graphical view]
PfamiPF01266. DAO. 1 hit.
[Graphical view]
PRINTSiPR01001. FADG3PDH.
PROSITEiPS00977. FAD_G3PDH_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2Imported.

Entry informationi

Entry nameiC3LVS2_VIBCM
AccessioniPrimary (citable) accession number: C3LVS2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: January 7, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.