C3LVM0 (C3LVM0_VIBCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Aminotransferase, class III EMBL ACP07525.1

Gene names

Ordered Locus Names:

VCM66_A0563

Organism

Vibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP] EMBL ACP07525.1

Taxonomic identifier

579112 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	465 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. RuleBase RU003560

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU003560
Molecular function	Aminotransferase EMBL ACP07525.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3LVM0 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: CC0B0B297F24E28C	FASTA	465	51,491
	10 20 30 40 50 60 MKTFDPLSSY SPTHWRSEGD INTTAARRDW LTHVNDETTQ NLLQRDANVF LHQAMSTPCL 70 80 90 100 110 120 APLASAAGCY LYDVSGKSYL DFHGNNVHQL GHGHPQVIEK ITEQMQTLPF APRRFTHETA 130 140 150 160 170 180 IRCAEKLTEI AGGELNRVLF APGGTSVIGM ALKLARHITQ NFKVVSLWDA FHGASLDAIS 190 200 210 220 230 240 VGGEACFRQG MGPLMAGVER IPPAITYRGA FPREDGSDVH YADYLEYVIE KEGGIGAFIA 250 260 270 280 290 300 EAVRNTDVQV PSRAYWQRVR EICDKHNVLL IIDDIPNGMG RSGEWFTHQA FGIEPDILCI 310 320 330 340 350 360 GKGLGAGLIP IAALLTKEKY NTAAQVSLGH YTHEKSPLGC AAALATIEVI EQHNLLAKVH 370 380 390 400 410 420 ADSIYMRQRL SQMQQQFSLI GDVRGIGLLW GIELVIDRHT KQRAHDEAEA ILYHCLRHGL 430 440 450 460 SFKVSQGNVI QLSPPLIISR QELDQALDIL YSALLAISQQ MNYSY

References

[1]

"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: M66-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001234 Genomic DNA. Translation: ACP07525.1.
RefSeq	YP_002812182.1. NC_012580.1.
3D structure databases
ProteinModelPortal	C3LVM0.
ModBase	Search...
Protein-protein interaction databases
STRING	579112.VCM66_A0563.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACP07525; ACP07525; VCM66_A0563.
GeneID	7781843.
KEGG	vcm:VCM66_A0563.
PATRIC	20070189. VBIVibCho108967_3103.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0160.
HOGENOM	HOG000020206.
KO	K00823.
OMA	DHESKAR.
ProtClustDB	PRK06082.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR005814. Aminotrans_3. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
PANTHER	PTHR11986. PTHR11986. 1 hit.
Pfam	PF00202. Aminotran_3. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
PROSITE	PS00600. AA_TRANSFER_CLASS_3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3LVM0_VIBCM

Accession

Primary (citable) accession number: C3LVM0

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)