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Protein
Submitted name:

Aminotransferase, class III

Gene

VCM66_A0563

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-3330-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Aminotransferase, class IIIImported
Gene namesi
Ordered Locus Names:VCM66_A0563Imported
OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome II

Interactioni

Protein-protein interaction databases

STRINGi579112.VCM66_A0563.

Family & Domainsi

Sequence similaritiesi

Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiNFNRIHV.
OrthoDBiEOG6QVRHN.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3LVM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKTFDPLSSY SPTHWRSEGD INTTAARRDW LTHVNDETTQ NLLQRDANVF
60 70 80 90 100
LHQAMSTPCL APLASAAGCY LYDVSGKSYL DFHGNNVHQL GHGHPQVIEK
110 120 130 140 150
ITEQMQTLPF APRRFTHETA IRCAEKLTEI AGGELNRVLF APGGTSVIGM
160 170 180 190 200
ALKLARHITQ NFKVVSLWDA FHGASLDAIS VGGEACFRQG MGPLMAGVER
210 220 230 240 250
IPPAITYRGA FPREDGSDVH YADYLEYVIE KEGGIGAFIA EAVRNTDVQV
260 270 280 290 300
PSRAYWQRVR EICDKHNVLL IIDDIPNGMG RSGEWFTHQA FGIEPDILCI
310 320 330 340 350
GKGLGAGLIP IAALLTKEKY NTAAQVSLGH YTHEKSPLGC AAALATIEVI
360 370 380 390 400
EQHNLLAKVH ADSIYMRQRL SQMQQQFSLI GDVRGIGLLW GIELVIDRHT
410 420 430 440 450
KQRAHDEAEA ILYHCLRHGL SFKVSQGNVI QLSPPLIISR QELDQALDIL
460
YSALLAISQQ MNYSY
Length:465
Mass (Da):51,491
Last modified:June 16, 2009 - v1
Checksum:iCC0B0B297F24E28C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07525.1.
RefSeqiYP_002812182.1. NC_012580.1.

Genome annotation databases

EnsemblBacteriaiACP07525; ACP07525; VCM66_A0563.
GeneIDi7781843.
KEGGivcm:VCM66_A0563.
PATRICi20070189. VBIVibCho108967_3103.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07525.1.
RefSeqiYP_002812182.1. NC_012580.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi579112.VCM66_A0563.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACP07525; ACP07525; VCM66_A0563.
GeneIDi7781843.
KEGGivcm:VCM66_A0563.
PATRICi20070189. VBIVibCho108967_3103.

Phylogenomic databases

eggNOGiCOG0160.
HOGENOMiHOG000020206.
KOiK00823.
OMAiNFNRIHV.
OrthoDBiEOG6QVRHN.

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-3330-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR005814. Aminotrans_3.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PANTHERiPTHR11986. PTHR11986. 1 hit.
PfamiPF00202. Aminotran_3. 1 hit.
[Graphical view]
PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
SUPFAMiSSF53383. SSF53383. 1 hit.
PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2Imported.

Entry informationi

Entry nameiC3LVM0_VIBCM
AccessioniPrimary (citable) accession number: C3LVM0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: March 4, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.