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C3LVM0

- C3LVM0_VIBCM

UniProt

C3LVM0 - C3LVM0_VIBCM

Protein
Submitted name:

Aminotransferase, class III

Gene

VCM66_A0563

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. pyridoxal phosphate binding Source: InterPro
    2. transaminase activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    AminotransferaseImported, Transferase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciVCHO579112:GJAW-3330-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Aminotransferase, class IIIImported
    Gene namesi
    Ordered Locus Names:VCM66_A0563Imported
    OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
    Taxonomic identifieri579112 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000001217: Chromosome II

    Interactioni

    Protein-protein interaction databases

    STRINGi579112.VCM66_A0563.

    Structurei

    3D structure databases

    ProteinModelPortaliC3LVM0.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0160.
    HOGENOMiHOG000020206.
    KOiK00823.
    OMAiIDHAHGA.
    OrthoDBiEOG6QVRHN.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PANTHERiPTHR11986. PTHR11986. 1 hit.
    PfamiPF00202. Aminotran_3. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMiSSF53383. SSF53383. 1 hit.
    PROSITEiPS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C3LVM0-1 [UniParc]FASTAAdd to Basket

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    MKTFDPLSSY SPTHWRSEGD INTTAARRDW LTHVNDETTQ NLLQRDANVF    50
    LHQAMSTPCL APLASAAGCY LYDVSGKSYL DFHGNNVHQL GHGHPQVIEK 100
    ITEQMQTLPF APRRFTHETA IRCAEKLTEI AGGELNRVLF APGGTSVIGM 150
    ALKLARHITQ NFKVVSLWDA FHGASLDAIS VGGEACFRQG MGPLMAGVER 200
    IPPAITYRGA FPREDGSDVH YADYLEYVIE KEGGIGAFIA EAVRNTDVQV 250
    PSRAYWQRVR EICDKHNVLL IIDDIPNGMG RSGEWFTHQA FGIEPDILCI 300
    GKGLGAGLIP IAALLTKEKY NTAAQVSLGH YTHEKSPLGC AAALATIEVI 350
    EQHNLLAKVH ADSIYMRQRL SQMQQQFSLI GDVRGIGLLW GIELVIDRHT 400
    KQRAHDEAEA ILYHCLRHGL SFKVSQGNVI QLSPPLIISR QELDQALDIL 450
    YSALLAISQQ MNYSY 465
    Length:465
    Mass (Da):51,491
    Last modified:June 16, 2009 - v1
    Checksum:iCC0B0B297F24E28C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07525.1.
    RefSeqiYP_002812182.1. NC_012580.1.

    Genome annotation databases

    EnsemblBacteriaiACP07525; ACP07525; VCM66_A0563.
    GeneIDi7781843.
    KEGGivcm:VCM66_A0563.
    PATRICi20070189. VBIVibCho108967_3103.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07525.1 .
    RefSeqi YP_002812182.1. NC_012580.1.

    3D structure databases

    ProteinModelPortali C3LVM0.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 579112.VCM66_A0563.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACP07525 ; ACP07525 ; VCM66_A0563 .
    GeneIDi 7781843.
    KEGGi vcm:VCM66_A0563.
    PATRICi 20070189. VBIVibCho108967_3103.

    Phylogenomic databases

    eggNOGi COG0160.
    HOGENOMi HOG000020206.
    KOi K00823.
    OMAi IDHAHGA.
    OrthoDBi EOG6QVRHN.

    Enzyme and pathway databases

    BioCyci VCHO579112:GJAW-3330-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR005814. Aminotrans_3.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    PANTHERi PTHR11986. PTHR11986. 1 hit.
    Pfami PF00202. Aminotran_3. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000521. Transaminase_4ab_Lys_Orn. 1 hit.
    SUPFAMi SSF53383. SSF53383. 1 hit.
    PROSITEi PS00600. AA_TRANSFER_CLASS_3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
      Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
      PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M66-2Imported.

    Entry informationi

    Entry nameiC3LVM0_VIBCM
    AccessioniPrimary (citable) accession number: C3LVM0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 16, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3