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C3LU56

- C3LU56_VIBCM

UniProt

C3LU56 - C3LU56_VIBCM

Protein
Submitted name:

Chitinase

Gene

chiA-2

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro
    2. chitinase activity Source: UniProtKB-EC

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. chitin catabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotationImported, Hydrolase

    Enzyme and pathway databases

    BioCyciVCHO579112:GJAW-2808-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ChitinaseImported (EC:3.2.1.14Imported)
    Gene namesi
    Name:chiA-2Imported
    Ordered Locus Names:VCM66_A0026Imported
    OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
    Taxonomic identifieri579112 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000001217: Chromosome II

    Subcellular locationi

    GO - Cellular componenti

    1. extracellular region Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi579112.VCM66_A0026.

    Structurei

    3D structure databases

    ProteinModelPortaliC3LU56.
    SMRiC3LU56. Positions 22-588.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 18 family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG3979.
    HOGENOMiHOG000272926.
    KOiK01183.
    OMAiDQGNNDQ.
    OrthoDBiEOG6V4G7X.

    Family and domain databases

    Gene3Di2.10.10.20. 1 hit.
    2.60.40.10. 1 hit.
    2.60.40.670. 1 hit.
    3.10.50.10. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR003610. CBM_fam5/12.
    IPR011583. Chitinase_II.
    IPR029070. Chitinase_insertion.
    IPR013540. ChitinaseA_N.
    IPR001223. Glyco_hydro18cat.
    IPR001579. Glyco_hydro_18_chit_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR022409. PKD/Chitinase_dom.
    IPR002859. PKD/REJ-like.
    IPR000601. PKD_dom.
    [Graphical view]
    PfamiPF02839. CBM_5_12. 1 hit.
    PF08329. ChitinaseA_N. 1 hit.
    PF00704. Glyco_hydro_18. 1 hit.
    PF02010. REJ. 1 hit.
    [Graphical view]
    SMARTiSM00495. ChtBD3. 1 hit.
    SM00636. Glyco_18. 1 hit.
    SM00089. PKD. 3 hits.
    [Graphical view]
    SUPFAMiSSF49299. SSF49299. 2 hits.
    SSF51055. SSF51055. 1 hit.
    SSF51445. SSF51445. 2 hits.
    SSF54556. SSF54556. 1 hit.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS01095. CHITINASE_18. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C3LU56-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRMTLCAAS IACALASTAM AAPSAPSVDV YGSNNLQFSK IELAMETTAG    50
    YNQMVKYHEE APITLKFNQW SGVTGNTYKI YFDGVEVATG PISGSQTTAQ 100
    FTYPKGGVYQ LVIEACDATG CTKSAPSEIT IADTDGSHLK PLKMNVDPNN 150
    KSYTIPQNTV VGTYFVEWSI YDRKFTVDNI PGQNLTHILY GFIPICGPNE 200
    SLKSVGGNSF NALQTACKGV PDFEVVIHDP WAAYQKSFPQ AGHQYSSPIK 250
    GNYAMLMALK KTYPDLKIIP SIGGWTLSDP FFSFTDKAKR DVFVASVKRF 300
    LKTWKFYDGV DIDWEYPGGG GQAADLGDPV KDGPAYVALM AELRAMLDEL 350
    EAETGRKYEL TSAIGVGHDK IEDVNYGQAV QYMDYIFAMT YDFYGGWNNV 400
    LGHQTALYCG SFMRPGQCDG KGVDENGEPY KGPAYTTDNG IQLLLAQGVP 450
    PSKLVVGAAM YGRGWEGVTP ASLKDPNDPM TGVGNGKLKG TTAQGVWEAG 500
    VIDYKGVKNF MLGANKTGVN GFEYGYDEQA EAPWVWNRTT GQLVTFDDDR 550
    SVKAKGAYVR NLGLAGLFSW EIDADNGDIL NAMHEGLAGG TTTPPVNKAP 600
    VANAGADITV TGPAAVSLDG SASKDSDGSI ASYLWEQTAG PAVTLTGANS 650
    AKASFNAAEV TEKQTFTFKL TVTDNKGATA TDTVVVTVNP KSTTPVNTAP 700
    VAAVSAPASV KAGATVVVDA SASSDADQDP LSFTWDLPVG INATVQGAKV 750
    TFVAGEYSQD TSLSFTVTVS DGKATSTASA SVLVEKKVGG GDACTNLWNA 800
    DAIYTGGQQV TWAGKTWEAK WWTRGEDPSK SGQWGVWKDL GAASCSTH 848
    Length:848
    Mass (Da):90,114
    Last modified:June 16, 2009 - v1
    Checksum:i66BECA294FA58233
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07011.1.
    RefSeqiYP_002811668.1. NC_012580.1.

    Genome annotation databases

    EnsemblBacteriaiACP07011; ACP07011; VCM66_A0026.
    GeneIDi7781322.
    KEGGivcm:VCM66_A0026.
    PATRICi20069168. VBIVibCho108967_2594.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001234 Genomic DNA. Translation: ACP07011.1 .
    RefSeqi YP_002811668.1. NC_012580.1.

    3D structure databases

    ProteinModelPortali C3LU56.
    SMRi C3LU56. Positions 22-588.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 579112.VCM66_A0026.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACP07011 ; ACP07011 ; VCM66_A0026 .
    GeneIDi 7781322.
    KEGGi vcm:VCM66_A0026.
    PATRICi 20069168. VBIVibCho108967_2594.

    Phylogenomic databases

    eggNOGi COG3979.
    HOGENOMi HOG000272926.
    KOi K01183.
    OMAi DQGNNDQ.
    OrthoDBi EOG6V4G7X.

    Enzyme and pathway databases

    BioCyci VCHO579112:GJAW-2808-MONOMER.

    Family and domain databases

    Gene3Di 2.10.10.20. 1 hit.
    2.60.40.10. 1 hit.
    2.60.40.670. 1 hit.
    3.10.50.10. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR003610. CBM_fam5/12.
    IPR011583. Chitinase_II.
    IPR029070. Chitinase_insertion.
    IPR013540. ChitinaseA_N.
    IPR001223. Glyco_hydro18cat.
    IPR001579. Glyco_hydro_18_chit_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR022409. PKD/Chitinase_dom.
    IPR002859. PKD/REJ-like.
    IPR000601. PKD_dom.
    [Graphical view ]
    Pfami PF02839. CBM_5_12. 1 hit.
    PF08329. ChitinaseA_N. 1 hit.
    PF00704. Glyco_hydro_18. 1 hit.
    PF02010. REJ. 1 hit.
    [Graphical view ]
    SMARTi SM00495. ChtBD3. 1 hit.
    SM00636. Glyco_18. 1 hit.
    SM00089. PKD. 3 hits.
    [Graphical view ]
    SUPFAMi SSF49299. SSF49299. 2 hits.
    SSF51055. SSF51055. 1 hit.
    SSF51445. SSF51445. 2 hits.
    SSF54556. SSF54556. 1 hit.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS01095. CHITINASE_18. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
      Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
      PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: M66-2Imported.

    Entry informationi

    Entry nameiC3LU56_VIBCM
    AccessioniPrimary (citable) accession number: C3LU56
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 16, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3