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Protein
Submitted name:

Chitinase

Gene

chiA-2

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
  2. chitinase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. chitin catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotationImported, Hydrolase

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-2808-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ChitinaseImported (EC:3.2.1.14Imported)
Gene namesi
Name:chiA-2Imported
Ordered Locus Names:VCM66_A0026Imported
OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome II

Subcellular locationi

GO - Cellular componenti

  1. extracellular region Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi579112.VCM66_A0026.

Structurei

3D structure databases

ProteinModelPortaliC3LU56.
SMRiC3LU56. Positions 22-588.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 18 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG3979.
HOGENOMiHOG000272926.
KOiK01183.
OMAiYWNDVAK.
OrthoDBiEOG6V4G7X.

Family and domain databases

Gene3Di2.10.10.20. 1 hit.
2.60.40.10. 1 hit.
2.60.40.670. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR003610. CBM_fam5/12.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR013540. ChitinaseA_N.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR022409. PKD/Chitinase_dom.
IPR002859. PKD/REJ-like.
IPR000601. PKD_dom.
[Graphical view]
PfamiPF02839. CBM_5_12. 1 hit.
PF08329. ChitinaseA_N. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
PF02010. REJ. 1 hit.
[Graphical view]
SMARTiSM00495. ChtBD3. 1 hit.
SM00636. Glyco_18. 1 hit.
SM00089. PKD. 3 hits.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 2 hits.
SSF51055. SSF51055. 1 hit.
SSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS01095. CHITINASE_18. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3LU56-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNRMTLCAAS IACALASTAM AAPSAPSVDV YGSNNLQFSK IELAMETTAG
60 70 80 90 100
YNQMVKYHEE APITLKFNQW SGVTGNTYKI YFDGVEVATG PISGSQTTAQ
110 120 130 140 150
FTYPKGGVYQ LVIEACDATG CTKSAPSEIT IADTDGSHLK PLKMNVDPNN
160 170 180 190 200
KSYTIPQNTV VGTYFVEWSI YDRKFTVDNI PGQNLTHILY GFIPICGPNE
210 220 230 240 250
SLKSVGGNSF NALQTACKGV PDFEVVIHDP WAAYQKSFPQ AGHQYSSPIK
260 270 280 290 300
GNYAMLMALK KTYPDLKIIP SIGGWTLSDP FFSFTDKAKR DVFVASVKRF
310 320 330 340 350
LKTWKFYDGV DIDWEYPGGG GQAADLGDPV KDGPAYVALM AELRAMLDEL
360 370 380 390 400
EAETGRKYEL TSAIGVGHDK IEDVNYGQAV QYMDYIFAMT YDFYGGWNNV
410 420 430 440 450
LGHQTALYCG SFMRPGQCDG KGVDENGEPY KGPAYTTDNG IQLLLAQGVP
460 470 480 490 500
PSKLVVGAAM YGRGWEGVTP ASLKDPNDPM TGVGNGKLKG TTAQGVWEAG
510 520 530 540 550
VIDYKGVKNF MLGANKTGVN GFEYGYDEQA EAPWVWNRTT GQLVTFDDDR
560 570 580 590 600
SVKAKGAYVR NLGLAGLFSW EIDADNGDIL NAMHEGLAGG TTTPPVNKAP
610 620 630 640 650
VANAGADITV TGPAAVSLDG SASKDSDGSI ASYLWEQTAG PAVTLTGANS
660 670 680 690 700
AKASFNAAEV TEKQTFTFKL TVTDNKGATA TDTVVVTVNP KSTTPVNTAP
710 720 730 740 750
VAAVSAPASV KAGATVVVDA SASSDADQDP LSFTWDLPVG INATVQGAKV
760 770 780 790 800
TFVAGEYSQD TSLSFTVTVS DGKATSTASA SVLVEKKVGG GDACTNLWNA
810 820 830 840
DAIYTGGQQV TWAGKTWEAK WWTRGEDPSK SGQWGVWKDL GAASCSTH
Length:848
Mass (Da):90,114
Last modified:June 16, 2009 - v1
Checksum:i66BECA294FA58233
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07011.1.
RefSeqiWP_001894571.1. NC_012580.1.
YP_002811668.1. NC_012580.1.

Genome annotation databases

EnsemblBacteriaiACP07011; ACP07011; VCM66_A0026.
GeneIDi7781322.
KEGGivcm:VCM66_A0026.
PATRICi20069168. VBIVibCho108967_2594.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001234 Genomic DNA. Translation: ACP07011.1.
RefSeqiWP_001894571.1. NC_012580.1.
YP_002811668.1. NC_012580.1.

3D structure databases

ProteinModelPortaliC3LU56.
SMRiC3LU56. Positions 22-588.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi579112.VCM66_A0026.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACP07011; ACP07011; VCM66_A0026.
GeneIDi7781322.
KEGGivcm:VCM66_A0026.
PATRICi20069168. VBIVibCho108967_2594.

Phylogenomic databases

eggNOGiCOG3979.
HOGENOMiHOG000272926.
KOiK01183.
OMAiYWNDVAK.
OrthoDBiEOG6V4G7X.

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-2808-MONOMER.

Family and domain databases

Gene3Di2.10.10.20. 1 hit.
2.60.40.10. 1 hit.
2.60.40.670. 1 hit.
3.10.50.10. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR003610. CBM_fam5/12.
IPR011583. Chitinase_II.
IPR029070. Chitinase_insertion.
IPR013540. ChitinaseA_N.
IPR001223. Glyco_hydro18cat.
IPR001579. Glyco_hydro_18_chit_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR022409. PKD/Chitinase_dom.
IPR002859. PKD/REJ-like.
IPR000601. PKD_dom.
[Graphical view]
PfamiPF02839. CBM_5_12. 1 hit.
PF08329. ChitinaseA_N. 1 hit.
PF00704. Glyco_hydro_18. 1 hit.
PF02010. REJ. 1 hit.
[Graphical view]
SMARTiSM00495. ChtBD3. 1 hit.
SM00636. Glyco_18. 1 hit.
SM00089. PKD. 3 hits.
[Graphical view]
SUPFAMiSSF49299. SSF49299. 2 hits.
SSF51055. SSF51055. 1 hit.
SSF51445. SSF51445. 2 hits.
SSF54556. SSF54556. 1 hit.
SSF81296. SSF81296. 1 hit.
PROSITEiPS01095. CHITINASE_18. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2Imported.

Entry informationi

Entry nameiC3LU56_VIBCM
AccessioniPrimary (citable) accession number: C3LU56
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: March 4, 2015
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.