C3LSM0 (C3LSM0_VIBCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endoglucanase-related protein EMBL ACP04896.1

Gene names

Ordered Locus Names:

VCM66_0573

Organism

Vibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP]

Taxonomic identifier

579112 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length	574 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cellulase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3LSM0 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: F36574CA2B8A3D29	FASTA	574	65,066
	10 20 30 40 50 60 MLLLTNHIGY ETQGPKQAVL LCGQTQLMDD CVLLVCARSH QTVAKLAIEW HGKVDNWHQG 70 80 90 100 110 120 QFHRIDFSDF TTPGDYYLRL EHTHSATFTI ARGVLMQRTF SDVLHYFKSQ RCSGQFDQQD 130 140 150 160 170 180 KQVPLLSTST TADVHGGWYD ASGDVSKYLS HLSYANYLNP QQTPLVVWNM LKGLAVLQHH 190 200 210 220 230 240 SGFASFSRTR LKDEALFGAD FLRRMQNSEG FFYMTVFDKW SKDTKQREIC AYATQQGHKS 250 260 270 280 290 300 DDYQAGFRQG GGMAIAALAA AARLDTHGEF TQADYLQAAE NGYWHLKEHN LAYLNDGVEN 310 320 330 340 350 360 IIDEYCALLA CCELYRTTEN DQYLAQAREW AQRLAKRQCS DEQIAHYWSA TSNGERPYFH 370 380 390 400 410 420 ASDAGLPVIA LCEYLNIETD TANYAQLQRV VEQACQFELA ITQQVSNPFG YPRQYVKGVE 430 440 450 460 470 480 SAKRTSFFIA QDNESGYWWQ GENARLASLA SMAYLAQPHL STAIAKPLEQ WSQNALNWIV 490 500 510 520 530 540 GLNPYNMCML DGHGHNNPDY LPHLGFFNAK GGVCNGITAG FDDPRDIAFN PAGQKDDMLQ 550 560 570 NWRWGEQWIP HGAWYLLAII SQFAHFTAHG EENQ

References

[1]

"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001233 Genomic DNA. Translation: ACP04896.1.
RefSeq	YP_002809347.1. NC_012578.1.
3D structure databases
ProteinModelPortal	C3LSM0.
ModBase	Search...
Protein-protein interaction databases
STRING	C3LSM0.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	7771857.
GenomeReviews	Gene locus VCM66_0573 in contig CP001233_GR.
KEGG	vcm:VCM66_0573.
PATRIC	20064960. VBIVibCho108967_0547.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	YFHAAEA.
ProtClustDB	CLSK874038.
Family and domain databases
InterPro	IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR001701. Glyco_hydro_9. IPR004197. Glyco_hydro_9_Ig-like. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
Pfam	PF02927. CelD_N. 1 hit. PF00759. Glyco_hydro_9. 1 hit. [Graphical view]
SUPFAM	SSF48208. Glyco_trans_6hp. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3LSM0_VIBCM

Accession

Primary (citable) accession number: C3LSM0

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	December 14, 2011
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)