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C3LQJ6 (C3LQJ6_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VCM66_0222
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP]
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length262 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C3LQJ6 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: D6CA2F36C5523AF6

FASTA26230,271
        10         20         30         40         50         60 
MNMSKVTVLI ANRLIRLTGN LFKMLSYPFH WVFPKLRFTI PAYSPAKLKM RANATIPRTI 

        70         80         90        100        110        120 
WQTNFTDQAS LPVYLNYLFN RLMSLNCDYR YVSTEARGEF LKEHTSPEVY DAYSRLTNGA 

       130        140        150        160        170        180 
AQADLWRLVV LNTYGGVYMD IDATLVWPLD KLLGDSQELY IRIKNNTEIT NYFIATAPNN 

       190        200        210        220        230        240 
PDLQATIEQV VYNVNHYEPS MGVYHSTGPT VLNNILSAKA VIHTQDRKYV CIQGTFTNEH 

       250        260 
FQYIDKPRGK WTHINPEDLV KK 

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001233 Genomic DNA. Translation: ACP04554.1.
RefSeqYP_002809005.1. NC_012578.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRINGC3LQJ6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7771515.
GenomeReviewsGene locus VCM66_0222 in contig CP001233_GR.
KEGGvcm:VCM66_0222.
PATRIC20064201. VBIVibCho108967_0210.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMARFTIPEF.
ProtClustDBCLSK870365.

Family and domain databases

InterProIPR007577. GlycoTrfase_DXD_sugar-bd_CS.
[Graphical view]
PfamPF04488. Gly_transf_sug. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3LQJ6_VIBCM
AccessionPrimary (citable) accession number: C3LQJ6
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: December 14, 2011
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)