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C3LPX9 (C3LPX9_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 19. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
HD-GYP/EAL family protein EMBL ACP04473.1
Gene names
Ordered Locus Names:VCM66_0137
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP]
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio

Protein attributes

Sequence length432 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C3LPX9 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: B853D23F69703A7D

FASTA43250,458
        10         20         30         40         50         60 
MVRCLWAAEC CWLPPKRKQP FEDTMYTTYV ARQPILNAKR HTLGYELLFR DGEKNAFPEY 

        70         80         90        100        110        120 
MDADRATYRL IVENFLSLGT NPRIARSRCF INFPHKSLIR RLPLTLPREQ IVVEILETCQ 

       130        140        150        160        170        180 
PTDDLFEAVQ ELSQRGYLLA LDDFVYSPAW ERFLPYVQIV KIDIMAMGLD KACEFVRGRL 

       190        200        210        220        230        240 
AQGSRRRFLA ERVETEDEFH QARHAGFTFF QGYFFSKPEI IKQRYVSPEH VIAMQLFREV 

       250        260        270        280        290        300 
CQPEVDYVRV ERLVAQDIAL SYKLLRFVNT MSDRISVSIS SFRQALVYLG QDKLRIFVSL 

       310        320        330        340        350        360 
AVASYISSKK PKELYNLSLQ RAQFCQLMAT HTHFKAHREQ AFLIGMFSVL DALLDTSIEQ 

       370        380        390        400        410        420 
LVEQLPLADD VKLALREREG PLGTLLDLEE CFEKADWQGV EQHCLELGFD LEDVRQELIE 

       430 
AQRWSQDINR LI

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001233 Genomic DNA. Translation: ACP04473.1.
RefSeqYP_002808924.1. NC_012578.1.

3D structure databases

ProteinModelPortalC3LPX9.
ModBaseSearch...

Protein-protein interaction databases

STRINGC3LPX9.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7771434.
GenomeReviewsGene locus VCM66_0137 in contig CP001233_GR.
KEGGvcm:VCM66_0137.
PATRIC20064011. VBIVibCho108967_0128.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMARQPIFNR.
ProtClustDBCLSK873876.

Family and domain databases

InterProIPR014408. dGMP_Pdiesterase_EAL/HD-GYP.
IPR001633. Diguanylate_PEstase_EAL_dom.
IPR013976. HDOD.
[Graphical view]
Gene3DG3DSA:3.20.20.450. G3DSA:3.20.20.450. 1 hit.
G3DSA:1.10.3150.10. HDOD. 1 hit.
KOK07181.
PfamPF00563. EAL. 1 hit.
PF08668. HDOD. 1 hit.
[Graphical view]
PIRSFPIRSF003180. DiGMPpdiest_YuxH. 1 hit.
SMARTSM00052. EAL. 1 hit.
[Graphical view]
SUPFAMSSF141868. SSF141868. 1 hit.
PROSITEPS50883. EAL. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3LPX9_VIBCM
AccessionPrimary (citable) accession number: C3LPX9
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: December 14, 2011
This is version 19 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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