C3LNS8 (C3LNS8_VIBCM) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative aspartate aminotransferase EMBL ACP06204.1

Gene names

Ordered Locus Names:

VCM66_1901

Organism

Vibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP] EMBL ACP06204.1

Taxonomic identifier

579112 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio › Vibrio cholerae

Protein attributes

Sequence length	404 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Aminotransferase EMBL ACP06204.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular_function	pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro transaminase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3LNS8 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: A4D8BD4720B2C532	FASTA	404	45,219
	10 20 30 40 50 60 MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIR 70 80 90 100 110 120 NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI GNGASELIVM AMQALLNNGD 130 140 150 160 170 180 EMLVPAPDYP LWTAAVALSG GKAVHYICDE EADWYPDLDD IRSKITPKTR GIVLINPNNP 190 200 210 220 230 240 TGAVYSRDFL LEIIEIARKH KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK 250 260 270 280 290 300 AYRVCGFRGG WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI 310 320 330 340 350 360 LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK MVLDFLVQEK 370 380 390 400 VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT TYSQ

References

[1]

"A recalibrated molecular clock and independent origins for the cholera pandemic clones." Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L. PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: M66-2.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001233 Genomic DNA. Translation: ACP06204.1.
RefSeq	YP_002810655.1. NC_012578.1.
3D structure databases
ProteinModelPortal	C3LNS8.
ModBase	Search...
Protein-protein interaction databases
STRING	579112.VCM66_1901.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACP06204; ACP06204; VCM66_1901.
GeneID	7773165.
KEGG	vcm:VCM66_1901.
PATRIC	20067534. VBIVibCho108967_1813.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0436.
HOGENOM	HOG000223042.
KO	K14260.
OMA	YQARDMR.
ProtClustDB	PRK09265.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR004839. Aminotransferase_I/II. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00155. Aminotran_1_2. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C3LNS8_VIBCM

Accession

Primary (citable) accession number: C3LNS8

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)