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Protein
Submitted name:

Putative aspartate aminotransferase

Gene

VCM66_1901

Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pyridoxal phosphate binding Source: InterPro
  2. transaminase activity Source: UniProtKB-KW

GO - Biological processi

  1. biosynthetic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

AminotransferaseImported, Transferase

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-1964-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative aspartate aminotransferaseImported
Gene namesi
Ordered Locus Names:VCM66_1901Imported
OrganismiVibrio cholerae serotype O1 (strain M66-2)Imported
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome I

Interactioni

Protein-protein interaction databases

STRINGi579112.VCM66_1901.

Structurei

3D structure databases

ProteinModelPortaliC3LNS8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0436.
HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.
OrthoDBiEOG6X9MJ6.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

C3LNS8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA
60 70 80 90 100
PDEILVDVIR NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI
110 120 130 140 150
GNGASELIVM AMQALLNNGD EMLVPAPDYP LWTAAVALSG GKAVHYICDE
160 170 180 190 200
EADWYPDLDD IRSKITPKTR GIVLINPNNP TGAVYSRDFL LEIIEIARKH
210 220 230 240 250
KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK AYRVCGFRGG
260 270 280 290 300
WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI
310 320 330 340 350
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK
360 370 380 390 400
MVLDFLVQEK VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT

TYSQ
Length:404
Mass (Da):45,219
Last modified:June 16, 2009 - v1
Checksum:iA4D8BD4720B2C532
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001233 Genomic DNA. Translation: ACP06204.1.
RefSeqiYP_002810655.1. NC_012578.1.

Genome annotation databases

EnsemblBacteriaiACP06204; ACP06204; VCM66_1901.
GeneIDi7773165.
KEGGivcm:VCM66_1901.
PATRICi20067534. VBIVibCho108967_1813.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001233 Genomic DNA. Translation: ACP06204.1.
RefSeqiYP_002810655.1. NC_012578.1.

3D structure databases

ProteinModelPortaliC3LNS8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi579112.VCM66_1901.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACP06204; ACP06204; VCM66_1901.
GeneIDi7773165.
KEGGivcm:VCM66_1901.
PATRICi20067534. VBIVibCho108967_1813.

Phylogenomic databases

eggNOGiCOG0436.
HOGENOMiHOG000223042.
KOiK14260.
OMAiQRNRTWE.
OrthoDBiEOG6X9MJ6.

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-1964-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2Imported.

Entry informationi

Entry nameiC3LNS8_VIBCM
AccessioniPrimary (citable) accession number: C3LNS8
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: January 7, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.