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C3LNS8 (C3LNS8_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:VCM66_1901 EMBL ACP06204.1
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP] EMBL ACP06204.1
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length404 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionAminotransferase EMBL ACP06204.1
Transferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processbiosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionpyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

transaminase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C3LNS8 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: A4D8BD4720B2C532

FASTA40445,219
        10         20         30         40         50         60 
MQNIGMSSKL DNVCYDIRGP VLKHAKRMEE EGHKILKLNI GNPAPFGFDA PDEILVDVIR 

        70         80         90        100        110        120 
NLPTSQGYCD SKGIYSARKA VVQYYQKKGI RSLDVEDVYI GNGASELIVM AMQALLNNGD 

       130        140        150        160        170        180 
EMLVPAPDYP LWTAAVALSG GKAVHYICDE EADWYPDLDD IRSKITPKTR GIVLINPNNP 

       190        200        210        220        230        240 
TGAVYSRDFL LEIIEIARKH KLMIFADEIY DKVLYDGAVH TSIATLADDV LVVTFNGLSK 

       250        260        270        280        290        300 
AYRVCGFRGG WMFLTGPKQQ AQGYIAGLDM LASMRLCANV PMQHAIQTAL GGYQSINELI 

       310        320        330        340        350        360 
LPGGRLLEQR DRAWELINQI PGISCVKPKG AMYLFPKIDT KMYPIKDDQK MVLDFLVQEK 

       370        380        390        400 
VLLVQGSGFN WPKPDHFRIV TLPHVEDLEI AISRFERFIT TYSQ 

« Hide

References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M66-2 EMBL ACP06204.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001233 Genomic DNA. Translation: ACP06204.1.
RefSeqYP_002810655.1. NC_012578.1.

3D structure databases

ProteinModelPortalC3LNS8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING579112.VCM66_1901.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP06204; ACP06204; VCM66_1901.
GeneID7773165.
KEGGvcm:VCM66_1901.
PATRIC20067534. VBIVibCho108967_1813.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0436.
HOGENOMHOG000223042.
KOK14260.
OMAYQARDMR.
OrthoDBEOG6X9MJ6.

Enzyme and pathway databases

BioCycVCHO579112:GJAW-1964-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR004839. Aminotransferase_I/II.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00155. Aminotran_1_2. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC3LNS8_VIBCM
AccessionPrimary (citable) accession number: C3LNS8
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)