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C3LN49

- GLGA_VIBCM

UniProt

C3LN49 - GLGA_VIBCM

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Protein

Glycogen synthase

Gene
glgA, VCM66_1666
Organism
Vibrio cholerae serotype O1 (strain M66-2)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Synthesizes alpha-1,4-glucan chains using ADP-glucose By similarity.UniRule annotation

Catalytic activityi

ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei18 – 181ADP-glucose By similarity

GO - Molecular functioni

  1. starch synthase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

BioCyciVCHO579112:GJAW-1729-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
Glycogen synthase (EC:2.4.1.21)
Alternative name(s):
Starch [bacterial glycogen] synthase
Gene namesi
Name:glgA
Ordered Locus Names:VCM66_1666
OrganismiVibrio cholerae serotype O1 (strain M66-2)
Taxonomic identifieri579112 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000001217: Chromosome I

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Glycogen synthaseUniRule annotationPRO_1000190091Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi579112.VCM66_1666.

Structurei

3D structure databases

ProteinModelPortaliC3LN49.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0297.
HOGENOMiHOG000294940.
KOiK00703.
OMAiHIGYDEP.
OrthoDBiEOG6JTC6Z.

Family and domain databases

HAMAPiMF_00484. Glycogen_synth.
InterProiIPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view]
PfamiPF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02095. glgA. 1 hit.

Sequencei

Sequence statusi: Complete.

C3LN49-1 [UniParc]FASTAAdd to Basket

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MEQFNVWFTV SEVQGLVKSG GLADVAKALP QALKALHQQV AIALPAYRSV    50
PGKEDAELVL ETELTHWPHT QYRVLKRDLD GVPIYLIDCP AYFDRPALYA 100
ENNQAYADNG ERFGFFSAAC LDVLPKLGIQ PDIIHANDWH TGLVPFLLKT 150
RYRYDSFFEQ VKSVLTVHNA IFKGIFSYHQ LEVIPELNLS GMEFLQYGHD 200
HVSMLRAGIA FADKVNAVSP NYAAELLTPL GAHGLVDDFV RRARDLHGIV 250
NGCDYSEWNP RTDHYLPATY SDEPESMRKG KALCKTALQE ELHLPVTDVP 300
LFGMVCRLTH QKGFHYLLPI LEQFLRNNVQ VVIVGTGEPE VAARLNKIAH 350
YHRAKFAFVE TYSERLAHWV EAGSDFFLMP SEFEACGLNQ IYSMAYGTLP 400
IVREVGGLKD TVNDYDKFPE RATGFGYQEP TPEALLITMQ RALLFYLQQP 450
EEMLKVQQRA MQQNFSWEES AQEYMKMYRL ARFG 484
Length:484
Mass (Da):55,067
Last modified:June 16, 2009 - v1
Checksum:i776D1D3E6BCC0920
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001233 Genomic DNA. Translation: ACP05975.1.
RefSeqiYP_002810426.1. NC_012578.1.

Genome annotation databases

EnsemblBacteriaiACP05975; ACP05975; VCM66_1666.
GeneIDi7772936.
KEGGivcm:VCM66_1666.
PATRICi20067084. VBIVibCho108967_1590.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001233 Genomic DNA. Translation: ACP05975.1 .
RefSeqi YP_002810426.1. NC_012578.1.

3D structure databases

ProteinModelPortali C3LN49.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 579112.VCM66_1666.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACP05975 ; ACP05975 ; VCM66_1666 .
GeneIDi 7772936.
KEGGi vcm:VCM66_1666.
PATRICi 20067084. VBIVibCho108967_1590.

Phylogenomic databases

eggNOGi COG0297.
HOGENOMi HOG000294940.
KOi K00703.
OMAi HIGYDEP.
OrthoDBi EOG6JTC6Z.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci VCHO579112:GJAW-1729-MONOMER.

Family and domain databases

HAMAPi MF_00484. Glycogen_synth.
InterProi IPR001296. Glyco_trans_1.
IPR011835. Glycogen/starch_synth.
IPR013534. Starch_synth_cat_dom.
[Graphical view ]
Pfami PF08323. Glyco_transf_5. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02095. glgA. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "A recalibrated molecular clock and independent origins for the cholera pandemic clones."
    Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
    PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: M66-2.

Entry informationi

Entry nameiGLGA_VIBCM
AccessioniPrimary (citable) accession number: C3LN49
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 28, 2009
Last sequence update: June 16, 2009
Last modified: May 14, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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