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C3LN15 (C3LN15_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.6.6.9 EMBL ACP05941.1
Gene names
Name:torA EMBL ACP05941.1
Ordered Locus Names:VCM66_1632
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP]
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length820 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C3LN15 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 6C1BF9FE639DBD82

FASTA82092,305
        10         20         30         40         50         60 
MAITRRSFLK GVATTSAASI IGPSLLTSVS AQAAETTGTW KVSGSHWGAF RAHIYGGKVQ 

        70         80         90        100        110        120 
ELKALELDTH PTEMLNGIQG ILYSPSRVRY PMVRLDWLKK HKYSAETRGN NRFIRVTWDE 

       130        140        150        160        170        180 
AIDLFYRELE RVQKQYGPWA LHAGQTGWNQ TGAFHNCTAM MQRAVGMHGN YITKVGDYST 

       190        200        210        220        230        240 
GAGQTIMPYV LGSTEVYAQG TSWSEILDNS DNIILWANDP VKNLQVGWNC ETHQSFGYLD 

       250        260        270        280        290        300 
QLKEKVAKGE INVVSVDPVK NKTQRFLQND HLYINPQTDV AFMLALAHVL YTENLYDKKF 

       310        320        330        340        350        360 
IETYCLGFEE FIPYVLGKSK DKVEKTPEWA ATICGVKPDA IRDFARMLVN GRTQLLFGWC 

       370        380        390        400        410        420 
IQRQEHGEQP YWMGAVLAAM IGQIGLPGGG ISYGHHYSGI GVPSTGFAGP GGFPRNLDQG 

       430        440        450        460        470        480 
AKPKWDNNDF NGYSRTIPVA RWIDAILEPG KKINHNGNTV TLPGFKMMVI SGCNPWHHHQ 

       490        500        510        520        530        540 
DRNKMKRAFQ KLETVVTIDF SWTATCRFSD IVLPACTQWE RNDIDSYGSY SGKGLIAMHR 

       550        560        570        580        590        600 
LVDPLFQSRT DFEIMTELTR RFGREKEYTR GMDEMEWVRS LYDECKKANE GKFAMPEFEE 

       610        620        630        640        650        660 
FWEKGFLDFG TGTPWVRHAD FRKDPEINAL GTPSGFIEIT SRKIGRYGYE HCQEHPMWFE 

       670        680        690        700        710        720 
KTERSHGGPG SDKHPFWLQS CHPDKRLHSQ MCEAEAFRAT YAVQGREPVY INPLDAKAKG 

       730        740        750        760        770        780 
IKDGDLVRVF NDRGQLLAGA VLSDSYPRGV IRIEEGAWYG PLTEKVGAIC TYGDPNTLTL 

       790        800        810        820 
DLGTSELAQA TSANTCIVDF EKFRGEVPPV TSFGGPIEVI 

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed: 19115014] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001233 Genomic DNA. Translation: ACP05941.1.
RefSeqYP_002810392.1. NC_012578.1.

3D structure databases

ProteinModelPortalC3LN15.
SMRC3LN15. Positions 40-819.
ModBaseSearch...

Protein-protein interaction databases

STRINGC3LN15.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID7772902.
GenomeReviewsGene locus VCM66_1632 in contig CP001233_GR.
KEGGvcm:VCM66_1632.
PATRIC20067018. VBIVibCho108967_1557.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMANHMIRAI.
ProtClustDBPRK15102.

Family and domain databases

InterProIPR009010. Asp_de-COase-like_fold.
IPR006657. MoPterin_dinucl-bd_dom.
IPR006656. Mopterin_OxRdtase.
IPR006655. Mopterin_OxRdtase_prok_CS.
IPR006311. TAT_signal.
IPR019546. TAT_signal_bac_arc.
[Graphical view]
Gene3DG3DSA:2.40.40.20. Asp_decarboxylase-like_fold. 1 hit.
KOK07811.
PfamPF00384. Molybdopterin. 1 hit.
PF01568. Molydop_binding. 1 hit.
[Graphical view]
SUPFAMSSF50692. Asp_decarb_fold. 1 hit.
TIGRFAMsTIGR01409. TAT_signal_seq. 1 hit.
PROSITEPS00490. MOLYBDOPTERIN_PROK_2. 1 hit.
PS00932. MOLYBDOPTERIN_PROK_3. 1 hit.
PS51318. TAT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3LN15_VIBCM
AccessionPrimary (citable) accession number: C3LN15
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)