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C3LLZ2 (C3LLZ2_VIBCM) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Asparagine--tRNA ligase HAMAP-Rule MF_00534
EC=6.1.1.22 HAMAP-Rule MF_00534
Alternative name(s):
Asparaginyl-tRNA synthetase HAMAP-Rule MF_00534
Gene names
Name:asnS HAMAP-Rule MF_00534
Ordered Locus Names:VCM66_1252
OrganismVibrio cholerae serotype O1 (strain M66-2) [Complete proteome] [HAMAP] EMBL ACP05568.1
Taxonomic identifier579112 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Vibrionales › Vibrionaceae › Vibrio ›

Protein attributes

Sequence length481 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-asparagine + tRNA(Asn) = AMP + diphosphate + L-asparaginyl-tRNA(Asn). HAMAP-Rule MF_00534 SAAS SAAS004522

Subunit structure

Homodimer By similarity. HAMAP-Rule MF_00534

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00534.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP-Rule MF_00534 RuleBase RU003746

Sequences

Sequence LengthMass (Da)Tools
C3LLZ2 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: E473289C857E4C41

FASTA48154,065
        10         20         30         40         50         60 
MALGCLYIST ETVINMTYAP VNDVLSGKLA VDSEVTVRGW IRTRRDSKAG ISFLAIYDGS 

        70         80         90        100        110        120 
CFNPIQAVVP NNLNNYDNEV LKLTTGCSVE VTGKIVESPA SGQAFELAAS DVKVVGWVED 

       130        140        150        160        170        180 
ADTYPMAKTR HSIEYLREVA HLRPRTNVIG AVARVRNCLA QAIHRFYHEQ GYFWVSAPLI 

       190        200        210        220        230        240 
TASDAEGAGE MFRVSTLDME NLPRTDAGKV DYNQDFFGKE TFLTVSGQLN AEAYACAISK 

       250        260        270        280        290        300 
VYTFGPTFRA ENSNTSRHLA EFWMVEPEVA FADLNTVAKL AEDMLKYVFK AVLAERRDDL 

       310        320        330        340        350        360 
EFFNDRINNE VIARLEQFVE SDFAQVDYTD AIEILKNCGK TFEFPVEWGI DLASEHERFL 

       370        380        390        400        410        420 
AEEHFKAPVI VKNYPKDIKA FYMRMNEDGK TVAAMDVLAP GIGEIIGGSQ REERLDILDA 

       430        440        450        460        470        480 
RMREFGIDPE HMDWYRDLRR YGTVPHAGFG LGFERLVSYV TGMGNVRDVI PFPRTPRSAS 


F

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References

[1]"A recalibrated molecular clock and independent origins for the cholera pandemic clones."
Feng L., Reeves P.R., Lan R., Ren Y., Gao C., Zhou Z., Ren Y., Cheng J., Wang W., Wang J., Qian W., Li D., Wang L.
PLoS ONE 3:E4053-E4053(2008) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: M66-2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001233 Genomic DNA. Translation: ACP05568.1.
RefSeqYP_002810019.1. NC_012578.1.

3D structure databases

ProteinModelPortalC3LLZ2.
ModBaseSearch...

Protein-protein interaction databases

STRING579112.VCM66_1252.
C3LLZ2.

Proteomic databases

PRIDEC3LLZ2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP05568; ACP05568; VCM66_1252.
GeneID7772529.
KEGGvcm:VCM66_1252.
PATRIC20066285. VBIVibCho108967_1193.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0017.
HOGENOMHOG000226033.
KOK01893.
OMAHEQGFYW.
ProtClustDBPRK03932.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
HAMAPMF_00534. Asn_tRNA_synth.
InterProIPR004364. aa-tRNA-synt_II.
IPR018150. aa-tRNA-synt_II-like.
IPR006195. aa-tRNA-synth_II.
IPR004522. Asn-tRNA-ligase_IIb.
IPR002312. Asp/Asn-tRNA-synth_IIb.
IPR012340. NA-bd_OB-fold.
IPR004365. NA-bd_OB_tRNA-helicase.
[Graphical view]
PANTHERPTHR22594. PTHR22594. 1 hit.
PTHR22594:SF6. PTHR22594:SF6. 1 hit.
PfamPF00152. tRNA-synt_2. 1 hit.
PF01336. tRNA_anti. 1 hit.
[Graphical view]
PRINTSPR01042. TRNASYNTHASP.
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMsTIGR00457. asnS. 1 hit.
PROSITEPS50862. AA_TRNA_LIGASE_II. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3LLZ2_VIBCM
AccessionPrimary (citable) accession number: C3LLZ2
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 1, 2013
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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