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C3KV31 (C3KV31_CLOB6) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alanine racemase EMBL ACQ52049.1
EC=5.1.1.1 EMBL ACQ52049.1
Gene names
Name:alr EMBL ACQ52049.1
Ordered Locus Names:CLJ_B3701 EMBL ACQ52049.1
OrganismClostridium botulinum (strain 657 / Type Ba4) [Complete proteome] [HAMAP] EMBL ACQ52049.1
Taxonomic identifier515621 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium ›

Protein attributes

Sequence length386 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622

Sequence similarities

Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
   LigandPyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
   Molecular functionIsomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACQ52049.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processD-alanine biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Molecular_functionalanine racemase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C3KV31 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 5D90B89D7985946D

FASTA38643,244
        10         20         30         40         50         60 
MFRNLRAVWA EIDLDNLQHN LKQIKKICGN KEIIGVIKAN AYGHGAMEIA PTLLENGVSR 

        70         80         90        100        110        120 
LAVAVLSEAM ELRMSGVKNP IMILGYTPWA LGDMLLDNDI EQSVYSYNDA LELSKIAVLK 

       130        140        150        160        170        180 
RKILKIHIVV DTGMGRIGFL PTKESVEDVY KISKLPNIEI EGVFSHFSSA DELDKDYTLY 

       190        200        210        220        230        240 
QMNKYNEFIN KLEEKNIQLP IKHIANSAAI IDLENTHLDA VRAGIIMYGY YPSNYVLRNN 

       250        260        270        280        290        300 
INLKPVMSLK TSIVHIKKVS SGEYISYGRT FKTKRESIIA TLPIGYADGY NRLLSNKGKV 

       310        320        330        340        350        360 
IVNGKLAPVI GRVCMDQCMI DVTFIENLKV GDVVTIMGEE NGVSYTAEDI ASQIGTISYE 

       370        380 
VICNVNKRVP RVYKKDGKII NVVNYI

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References

[1]"Genome sequence of Clostridium botulinum Ba4 strain 657."
Shrivastava S., Brown J.L., Bruce D., Detter C., Munk C., Smith L.A., Smith T.J., Sutton G., Brettin T.S.
Submitted (MAY-2008) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 657 / Type Ba4.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001083 Genomic DNA. Translation: ACQ52049.1.
RefSeqYP_002864409.1. NC_012658.1.

3D structure databases

ProteinModelPortalC3KV31.
ModBaseSearch...

Protein-protein interaction databases

STRING515621.CLJ_B3701.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACQ52049; ACQ52049; CLJ_B3701.
GeneID7880028.
KEGGcbi:CLJ_B3701.
PATRIC19415713. VBICloBot19908_3855.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0787.
HOGENOMHOG000031444.
KOK01775.
OMAPRIPRRY.
ProtClustDBPRK00053.

Enzyme and pathway databases

UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3KV31_CLOB6
AccessionPrimary (citable) accession number: C3KV31
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 1, 2013
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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