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C3KN89 (C3KN89_RHISN) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative 4-hydroxyphenylpyruvate dioxygenase protein EMBL ACP23719.1
Gene names
Ordered Locus Names:NGR_b22740 EMBL ACP23719.1
Encoded onPlasmid sym pNGR234b
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP] EMBL ACP23719.1
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium ›

Protein attributes

Sequence length630 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C3KN89 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 72A1B52F3CC87FB6

FASTA63069,893
        10         20         30         40         50         60 
MKTSIATVSI SGDLPEKLAA IAAAGFDGVE IFENDFLAFD GSPADVGRMV RDHGLEITLF 

        70         80         90        100        110        120 
QPFRDFEGMP EPHRTRTFDR AERKFDVMQE LGTDLVLVCS NVSPISLGGI DRAAADFREL 

       130        140        150        160        170        180 
GERAAKRGLR VGYEALAWGR HISDHRDAWE IVRRADHPNI GLILDSFHTL SRKIEVNSIR 

       190        200        210        220        230        240 
SIPKEKIFIV QLADAPMIDM DLLYWSRHFR NMPGEGDLPI TEFTRAIAET GYDGYFSLEI 

       250        260        270        280        290        300 
FNDQFRGGAA KPIATDGHRS LIYLSDQVRR HPNAGSLTVA PMPERAAVER VGFVEFAADD 

       310        320        330        340        350        360 
DDAAELTAIL KTLGFRKAAT HRSKDVELYQ QGDIRILINT DEGGFAGSSY AVHGSSAYAM 

       370        380        390        400        410        420 
ALVVDDAKEA MERALALDAE PFSQPVAIGE VELPAVRGVG GGLLYLLDDK GDLGRIFEID 

       430        440        450        460        470        480 
FEPFEDEGVT VENAGLRSVD HVAQTVAYEQ MPTWLLFYTS IFAAEKTPMV DIIDPAGLVR 

       490        500        510        520        530        540 
SQVVENASGT LRLTLNGAEN RRTLAGHFIA ETFGSGIQHL AFHTDNIFAT AAALRRNGFR 

       550        560        570        580        590        600 
PLQISPNYYD DVEARFGLEP KLTERLRAEN ILYDRDENGE YFQLYSPTYG EGFFFEIVER 

       610        620        630 
RGYRGYGAAN AIFRIAALKK HLRPEGLPKL

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References

[1]"An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234."
Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., Raasch C., Liesegang H., Broughton W.J.
J. Bacteriol. 186:535-542(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234 EMBL ACP23719.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000874 Genomic DNA. Translation: ACP23719.1.
RefSeqYP_002824472.1. NC_012586.1.

3D structure databases

ProteinModelPortalC3KN89.
ModBaseSearch...

Protein-protein interaction databases

STRING394.NGR_b22740.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP23719; ACP23719; NGR_b22740.
GeneID7788823.
KEGGrhi:NGR_b22740.
PATRIC32306137. VBIRhiSp122450_2702.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3185.
HOGENOMHOG000219006.
KOK00457.
OMAILVCSNV.
ProtClustDBCLSK892340.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
InterProIPR005956. 4OHPhenylPyrv_dOase.
IPR004360. Glyas_Fos-R_dOase_dom.
IPR013022. Xyl_isomerase-like_TIM-brl.
[Graphical view]
PANTHERPTHR11959. PTHR11959. 1 hit.
PfamPF01261. AP_endonuc_2. 1 hit.
PF00903. Glyoxalase. 1 hit.
[Graphical view]
SUPFAMSSF51658. Xyl_isomerase-like_TIM-brl. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC3KN89_RHISN
AccessionPrimary (citable) accession number: C3KN89
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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