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C3KMN0 (C3KMN0_RHISN) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 36. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
EC=4.1.1.39 EMBL ACP23645.1
Gene names
Name:rbcL1 EMBL ACP23645.1
Ordered Locus Names:NGR_b22000 EMBL ACP23645.1
Encoded onPlasmid pNGR234b EMBL ACP23645.1
OrganismRhizobium sp. (strain NGR234) [Complete proteome] [HAMAP] EMBL ACP23645.1
Taxonomic identifier394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length418 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the RuBisCO large chain family. RuleBase RU004228

Ontologies

Keywords
   Molecular functionLyase EMBL ACP23645.1
   Technical termComplete proteome
Plasmid EMBL ACP23645.1
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C3KMN0 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 31958AC7B5449652

FASTA41844,863
        10         20         30         40         50         60 
MIRITYRIET PGDVEALAAK IASDQSTGTF VLVPGETEEL KARVAARVVA IRHLEPGDRP 

        70         80         90        100        110        120 
SWPEEAGGAK RFNRAEADID FPLDAVGTDL AALMTIAIAG VYSIKGMTGV RIVDMQLPPE 

       130        140        150        160        170        180 
FGRAHPGPQF GIPGSRRLTG VEKRPIIGTI VKPALGLRPE ETAALVGELL SSGVDFIKDD 

       190        200        210        220        230        240 
EKLMSPAYSP LKARIAAIMP KILDHEQKTG KKVMYAFGIS HTDPDEMMRN HDLVVEAGGN 

       250        260        270        280        290        300 
AGVVNINSIG MGGVAFLRKR SGIVLHAHRN GWDILTRHGG LGMEFSVWQQ FWRLIGVDQF 

       310        320        330        340        350        360 
QINGIRVKYW EPDESFVKSF KAAGTPLFSE RDCPLPVVGS GQWGGQAPET YARTGGSTDL 

       370        380        390        400        410 
LYLCGGGIVS HPGGAGAGVR AVRQAWEAAV AGIPLADYAR DHPELAQSLI KFADGNGT 

« Hide

References

[1]"An evolutionary hot spot: the pNGR234b replicon of Rhizobium sp. strain NGR234."
Streit W.R., Schmitz R.A., Perret X., Staehelin C., Deakin W.J., Raasch C., Liesegang H., Broughton W.J.
J. Bacteriol. 186:535-542(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234.
[2]"Rhizobium sp. strain NGR234 possesses a remarkable number of secretion systems."
Schmeisser C., Liesegang H., Krysciak D., Bakkou N., Le Quere A., Wollherr A., Heinemeyer I., Morgenstern B., Pommerening-Roeser A., Flores M., Palacios R., Brenner S., Gottschalk G., Schmitz R.A., Broughton W.J., Perret X., Strittmatter A.W., Streit W.R.
Appl. Environ. Microbiol. 75:4035-4045(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: NGR234 EMBL ACP23645.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000874 Genomic DNA. Translation: ACP23645.1.
RefSeqYP_002824398.1. NC_012586.1.

3D structure databases

ProteinModelPortalC3KMN0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING394.NGR_b22000.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACP23645; ACP23645; NGR_b22000.
GeneID7789521.
KEGGrhi:NGR_b22000.
PATRIC32305987. VBIRhiSp122450_2627.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1850.
HOGENOMHOG000230831.
KOK01601.
OMADYARDHP.
OrthoDBEOG62K1SK.

Enzyme and pathway databases

BioCycSFRE394:GBYN-5891-MONOMER.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR020878. RuBisCo_large_chain_AS.
IPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 1 hit.
[Graphical view]
SUPFAMSSF51649. SSF51649. 1 hit.
SSF54966. SSF54966. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3KMN0_RHISN
AccessionPrimary (citable) accession number: C3KMN0
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: July 9, 2014
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)