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UniProtKB - C3KCR0 (C3KCR0_PSEFS)

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Protein
Submitted name:

Putative type III secretion protein

Gene

rscC

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion proteinImported
Gene namesi
Name:rscCImported
Ordered Locus Names:PFLU_0721Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas ›
Proteomesi
  • UP000002332 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiC3KCR0.

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU0721.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini197 – 329Secretin_NInterPro annotationAdd BLAST133

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiView protein in InterPro
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
PfamiView protein in Pfam
PF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

C3KCR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHNKISKHTC LHIDPPDTSS RRAKWQWLVL LGCIMAPAHN LLAAIPAEWK 
        60         70         80         90        100
NTAYAYEADH KPLREVLEDF AQTFGTQLQI EGLLEGDVNG KIRANTPQSM 
       110        120        130        140        150
LDRLGVEHRF QWYLYNNTLF VSTLDQQESA RLEVSSETIS DLKQALTDIG 
       160        170        180        190        200
LLDSRFGWGE LPEDGVVLVS GPKTYIDQIK QFSSKRRSAD EKQSVLSFPL 
       210        220        230        240        250
KFANAADRKV DYRGEKLVVP GVANILRGLL EPRSASTLTG MSQPDSSQPS 
       260        270        280        290        300
PLTPNVPRLG NPLLGQMLGA NGNAGQLDTG PTVTPRAPVS KSRIRVEADV 
       310        320        330        340        350
RNNAVLIYDL PERQAMYRDL ITQLDVARKL IEIDAIILDI ERTQLREFGV 
       360        370        380        390        400
NWGFQNSRFR GGVNMAPGTS SQVSIENRDR FYADIRALEA KGLATMVSNP 
       410        420        430        440        450
SVLTLENQPA VIDFNRTQYI SPGRDYATIL PVTVGTSLQV VPRVTTGRGV 
       460        470        480        490        500
HQIHLVVDIE DGNFDETNPE RDPNHPDVRR GKVSTQAVMQ EKRSLVVGGF 
       510        520        530        540        550
HVTDSSDQQK KIPLLGDIPL LGKTLFSSTE RHNNRRERLF ILTPRVIGDQ 
       560        570        580        590        600
DDPSRYLPQD DQAELQAALT PLARRYSPHQ PVIKRSDIIT TLARLVSGEV 
       610        620        630        640        650
PKAFNAAPMP LGLNTLCSTR DLLALNTERS QWYAGPDYNV AVVVLRNQFK 
       660        670        680        690        700
RNVRIDEKEC SNSQTLAVTV WPRAWLKPGE EAEVFIAMRP VVKDEHLSVP 
       710 
RPSLITPTQK ATP
Length:713
Mass (Da):79,486
Last modified:June 16, 2009 - v1
Checksum:i331E247B509A7245
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY46990.1.
RefSeqiWP_012722095.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY46990; CAY46990; PFLU_0721.
KEGGipfs:PFLU_0721.
PATRICifig|216595.4.peg.959.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY46990.1.
RefSeqiWP_012722095.1. NC_012660.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216595.PFLU0721.

Proteomic databases

PRIDEiC3KCR0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAY46990; CAY46990; PFLU_0721.
KEGGipfs:PFLU_0721.
PATRICifig|216595.4.peg.959.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiYLMARIS.
OrthoDBiPOG091H00DF.

Family and domain databases

InterProiView protein in InterPro
IPR005644. NolW-like.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
PfamiView protein in Pfam
PF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC3KCR0_PSEFS
AccessioniPrimary (citable) accession number: C3KCR0
Entry historyiIntegrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: June 7, 2017
This is version 50 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.