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Protein
Submitted name:

Putative type III secretion protein

Gene

rscC

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative type III secretion proteinImported
Gene namesi
Name:rscCImported
Ordered Locus Names:PFLU_0721Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
Proteomesi
  • UP000002332 Componenti: Chromosome

Subcellular locationi

  • Cell outer membrane UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU0721.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini197 – 329133Secretin_NInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the GSP D family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiYLMARIS.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR010563. Pilus_assembly_TraK.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
PF06586. TraK. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.

Sequencei

Sequence statusi: Complete.

C3KCR0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHNKISKHTC LHIDPPDTSS RRAKWQWLVL LGCIMAPAHN LLAAIPAEWK
60 70 80 90 100
NTAYAYEADH KPLREVLEDF AQTFGTQLQI EGLLEGDVNG KIRANTPQSM
110 120 130 140 150
LDRLGVEHRF QWYLYNNTLF VSTLDQQESA RLEVSSETIS DLKQALTDIG
160 170 180 190 200
LLDSRFGWGE LPEDGVVLVS GPKTYIDQIK QFSSKRRSAD EKQSVLSFPL
210 220 230 240 250
KFANAADRKV DYRGEKLVVP GVANILRGLL EPRSASTLTG MSQPDSSQPS
260 270 280 290 300
PLTPNVPRLG NPLLGQMLGA NGNAGQLDTG PTVTPRAPVS KSRIRVEADV
310 320 330 340 350
RNNAVLIYDL PERQAMYRDL ITQLDVARKL IEIDAIILDI ERTQLREFGV
360 370 380 390 400
NWGFQNSRFR GGVNMAPGTS SQVSIENRDR FYADIRALEA KGLATMVSNP
410 420 430 440 450
SVLTLENQPA VIDFNRTQYI SPGRDYATIL PVTVGTSLQV VPRVTTGRGV
460 470 480 490 500
HQIHLVVDIE DGNFDETNPE RDPNHPDVRR GKVSTQAVMQ EKRSLVVGGF
510 520 530 540 550
HVTDSSDQQK KIPLLGDIPL LGKTLFSSTE RHNNRRERLF ILTPRVIGDQ
560 570 580 590 600
DDPSRYLPQD DQAELQAALT PLARRYSPHQ PVIKRSDIIT TLARLVSGEV
610 620 630 640 650
PKAFNAAPMP LGLNTLCSTR DLLALNTERS QWYAGPDYNV AVVVLRNQFK
660 670 680 690 700
RNVRIDEKEC SNSQTLAVTV WPRAWLKPGE EAEVFIAMRP VVKDEHLSVP
710
RPSLITPTQK ATP
Length:713
Mass (Da):79,486
Last modified:June 16, 2009 - v1
Checksum:i331E247B509A7245
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY46990.1.
RefSeqiWP_012722095.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY46990; CAY46990; PFLU_0721.
GeneIDi7822144.
KEGGipfs:PFLU_0721.
PATRICi19895672. VBIPseFlu98510_0959.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY46990.1.
RefSeqiWP_012722095.1. NC_012660.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216595.PFLU0721.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAY46990; CAY46990; PFLU_0721.
GeneIDi7822144.
KEGGipfs:PFLU_0721.
PATRICi19895672. VBIPseFlu98510_0959.

Phylogenomic databases

eggNOGiENOG4105K44. Bacteria.
COG1450. LUCA.
KOiK03219.
OMAiYLMARIS.
OrthoDBiEOG6423BN.

Family and domain databases

InterProiIPR005644. NolW-like.
IPR010563. Pilus_assembly_TraK.
IPR004846. T2SS/T3SS.
IPR003522. T3SS_OM_pore_YscC.
[Graphical view]
PfamiPF00263. Secretin. 1 hit.
PF03958. Secretin_N. 1 hit.
PF06586. TraK. 1 hit.
[Graphical view]
PRINTSiPR01337. TYPE3OMGPROT.
TIGRFAMsiTIGR02516. type_III_yscC. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBW25Imported.

Entry informationi

Entry nameiC3KCR0_PSEFS
AccessioniPrimary (citable) accession number: C3KCR0
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: March 16, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.