C3KCD8 (C3KCD8_PSEFS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative short-chain dehydrogenase/reductase EMBL CAY49564.1

Gene names

Ordered Locus Names:

PFLU_3339 EMBL CAY49564.1

Organism

Pseudomonas fluorescens (strain SBW25) [Complete proteome] [HAMAP] EMBL CAY49564.1

Taxonomic identifier

216595 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas fluorescens group › Pseudomonas fluorescens

Protein attributes

Sequence length	274 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family. RuleBase RU000363

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	oxidation-reduction process Inferred from electronic annotation. Source: GOC
Molecular_function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3KCD8 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: 4ADFA78F0E713260	FASTA	274	29,358
	10 20 30 40 50 60 MEQQMSTSSE RTAIVTGASS GIGRATAEAL VRAGYTVFGT SRKATDTPTQ VTMLVCDVTD 70 80 90 100 110 120 DDAVSALVST VLARTGRIDL LVNNAGVGLL GGAEEFSISQ VQALFDVNLF GVIRMTHAVL 130 140 150 160 170 180 PSMRANGQGR IINIGSILGL VPAPYSAHYS AVKHALEGYS ESLDHEVRAF NIRVSIIEPA 190 200 210 220 230 240 FVRTVFDQNG IEPDSPLKEY DQARAGFKAL LADVMPNADR PEVVATVVVE AASDIHPKLR 250 260 270 YTAGKAAKQI SLLRRFAPAG VFDKSLRKQF RLPV

References

[1]

"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M., Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R. Genome Biol. 10:R51-R51(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SBW25 EMBL CAY49564.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM181176 Genomic DNA. Translation: CAY49564.1.
RefSeq	YP_002872909.1. NC_012660.1.
3D structure databases
ProteinModelPortal	C3KCD8.
ModBase	Search...
Protein-protein interaction databases
STRING	216595.PFLU3339.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAY49564; CAY49564; PFLU_3339.
GeneID	7820106.
KEGG	pfs:PFLU3339.
PATRIC	19900798. VBIPseFlu98510_3501.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1028.
OMA	EPAFVRT.
ProtClustDB	PRK06179.
Family and domain databases
Gene3D	3.40.50.720. 1 hit.
InterPro	IPR002198. DH_sc/Rdtase_SDR. IPR002347. Glc/ribitol_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Pfam	PF00106. adh_short. 1 hit. [Graphical view]
PIRSF	PIRSF000126. 11-beta-HSD1. 1 hit.
PRINTS	PR00081. GDHRDH. PR00080. SDRFAMILY.
ProtoNet	Search...

Entry information

Entry name

C3KCD8_PSEFS

Accession

Primary (citable) accession number: C3KCD8

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)