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C3KAZ9 (C3KAZ9_PSEFS) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 34. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:PFLU_2911 EMBL CAY49138.1
OrganismPseudomonas fluorescens (strain SBW25) [Complete proteome] [HAMAP] EMBL CAY49138.1
Taxonomic identifier216595 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length838 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C3KAZ9 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: B50C7702D56DA6C7

FASTA83892,892
        10         20         30         40         50         60 
MPKPLSEYNR KRDFGVTGEP AGRAPAGKRN ASALSFVIQK HDARNLHYDF RLELDGVLLS 

        70         80         90        100        110        120 
WAVPKGPSLD PSQKRLAVHV EDHPLSYGSF EGSIPAGQYG AGDVIVWDRG IWQPHDDPRK 

       130        140        150        160        170        180 
AYAAGKLTFT LVGEKLSGDW ALVRTRLKGS GDKEQWLLIK EKDAQARPAD DYDIVQAQPD 

       190        200        210        220        230        240 
SVVSDASAGK SNVKYNVKYN VKYNAKPSTK ATRQQAAATA LPEQFNPQLA TLVDRAPEGD 

       250        260        270        280        290        300 
WQYEIKFDGY RMLTRIRDGE VRLFTRNGHD WTERLPRQVK ALQALKLKDS WLDGEVVSLN 

       310        320        330        340        350        360 
GDGLPDFQAL QNAFDIGRSL DIVYYLFDAP FLNGQDQRQA PVEARRAALK DALAVSRSKL 

       370        380        390        400        410        420 
LRFSEAFTAH PRDIFESACD LALEGVIGKR LGSPYVSSRS ADWIKLKCRL RQEFVIVGYT 

       430        440        450        460        470        480 
RPQGSRSGFG ALLLAVNDDA GLVYAGRVGT GFDHASLKAI YAQLKPLERK TSPLEKPLSS 

       490        500        510        520        530        540 
AQARGVHWVE PTLVGEVQFA EWTREGVVRQ AAFVGLRSDK PAAEIIHELP RTANAMKPAK 

       550        560        570        580        590        600 
KTSAAVTITH PDRVIDPQSG TRKQQLAQFY DSISQWILPF LRHRPVSLLR APEGIEGEPF 

       610        620        630        640        650        660 
FQKHSERLAI PNIKHLDQAL DPGHARLMEI DSTRALIGAV QMGAVEFHTW GATSDKIETP 

       670        680        690        700        710        720 
DLFVLDLDPD PALPWKAMLE AAQLTLSVLD ELGLQAFVKT SGGKGLHLVV PLARRDGWDT 

       730        740        750        760        770        780 
VKAFAKAIAQ FMTEQLPERF TATSGPKNRV GKIFIDYLRN ARGASTVAAY SVRARPGLPV 

       790        800        810        820        830 
SVPISREELK GLRSAQQWTV ANVQQRLNGL KADPWAGYTN RQKLSQKMWD KLGARPPV 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AM181176 Genomic DNA. Translation: CAY49138.1.
RefSeqYP_002872489.1. NC_012660.1.

3D structure databases

ProteinModelPortalC3KAZ9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING216595.PFLU2911.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAY49138; CAY49138; PFLU_2911.
GeneID7818267.
KEGGpfs:PFLU2911.
PATRIC19899974. VBIPseFlu98510_3090.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG3285.
KOK01971.
OMAHPLDYAD.
OrthoDBEOG661H49.
ProtClustDBPRK05972.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3KAZ9_PSEFS
AccessionPrimary (citable) accession number: C3KAZ9
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: April 16, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)