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C3K7I7

- C3K7I7_PSEFS

UniProt

C3K7I7 - C3K7I7_PSEFS

Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

PFLU_1312

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:PFLU_1312Imported
    OrganismiPseudomonas fluorescens (strain SBW25)Imported
    Taxonomic identifieri216595 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002332: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi216595.PFLU1312.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C3K7I7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKAFAELYAN LDATTSSNAK LAALQAYFRH AAPEDAAWAV YFLSGGRPRQ    50
    LVPTRLLRDM ATEASGIEPW LFEESYQSVG DLAETISLLL PESPYTSEDG 100
    LAVWLEEKLL PLRGLPPLDL AARLPALWAQ LDQPSLMVCI KLITGSFRVG 150
    VSKLLVTRAL AAMAELDSKR VAQRLVGYTD LSNRPTPEGY LKLIAPESSD 200
    EHAQRGGQPY PFFLAHGLAQ PVEQFDTLLG SPADWQVEWK WDGIRAQLVK 250
    RDGRLWIWSR GEELVTERFP ELHSLVSGLP DGTVIDGEIV VWKDAVQPFA 300
    QLQQRIGRKT LSKKVLEDAP VAVLAYDLLE HQGDDWRNHT QAERRAQLEQ 350
    VIAGCNQPVL LASPLLTANS WQDLAEQREA SRSLGVEGMM LKARDGLYGV 400
    GRTKDMGVWW KWKVDPFSVD AVLIYAQRGH GRRASLYSDY TFAVWDGPSG 450
    SERTLVPFAK AYSGLTDEEM RKVDAIVRKT TVEKFGPVSS VTPSMVFELG 500
    FEGIALSKRH KSGIAVRFPR MLRWRQDKSV EDADNLATLQ DLLT 544
    Length:544
    Mass (Da):60,683
    Last modified:June 16, 2009 - v1
    Checksum:i3C54542ECD9C2746
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM181176 Genomic DNA. Translation: CAY47568.1.
    RefSeqiWP_012722626.1. NC_012660.1.
    YP_002870963.1. NC_012660.1.

    Genome annotation databases

    EnsemblBacteriaiCAY47568; CAY47568; PFLU_1312.
    GeneIDi7819910.
    KEGGipfs:PFLU1312.
    PATRICi19896850. VBIPseFlu98510_1543.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM181176 Genomic DNA. Translation: CAY47568.1 .
    RefSeqi WP_012722626.1. NC_012660.1.
    YP_002870963.1. NC_012660.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216595.PFLU1312.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAY47568 ; CAY47568 ; PFLU_1312 .
    GeneIDi 7819910.
    KEGGi pfs:PFLU1312.
    PATRICi 19896850. VBIPseFlu98510_1543.

    Phylogenomic databases

    eggNOGi COG1793.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SBW25Imported.

    Entry informationi

    Entry nameiC3K7I7_PSEFS
    AccessioniPrimary (citable) accession number: C3K7I7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 16, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3