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C3K7I7

- C3K7I7_PSEFS

UniProt

C3K7I7 - C3K7I7_PSEFS

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Protein
Submitted name:

Putative ATP-dependent DNA ligase

Gene

PFLU_1312

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:PFLU_1312Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002332: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU1312.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3K7I7-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKAFAELYAN LDATTSSNAK LAALQAYFRH AAPEDAAWAV YFLSGGRPRQ
60 70 80 90 100
LVPTRLLRDM ATEASGIEPW LFEESYQSVG DLAETISLLL PESPYTSEDG
110 120 130 140 150
LAVWLEEKLL PLRGLPPLDL AARLPALWAQ LDQPSLMVCI KLITGSFRVG
160 170 180 190 200
VSKLLVTRAL AAMAELDSKR VAQRLVGYTD LSNRPTPEGY LKLIAPESSD
210 220 230 240 250
EHAQRGGQPY PFFLAHGLAQ PVEQFDTLLG SPADWQVEWK WDGIRAQLVK
260 270 280 290 300
RDGRLWIWSR GEELVTERFP ELHSLVSGLP DGTVIDGEIV VWKDAVQPFA
310 320 330 340 350
QLQQRIGRKT LSKKVLEDAP VAVLAYDLLE HQGDDWRNHT QAERRAQLEQ
360 370 380 390 400
VIAGCNQPVL LASPLLTANS WQDLAEQREA SRSLGVEGMM LKARDGLYGV
410 420 430 440 450
GRTKDMGVWW KWKVDPFSVD AVLIYAQRGH GRRASLYSDY TFAVWDGPSG
460 470 480 490 500
SERTLVPFAK AYSGLTDEEM RKVDAIVRKT TVEKFGPVSS VTPSMVFELG
510 520 530 540
FEGIALSKRH KSGIAVRFPR MLRWRQDKSV EDADNLATLQ DLLT
Length:544
Mass (Da):60,683
Last modified:June 16, 2009 - v1
Checksum:i3C54542ECD9C2746
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY47568.1.
RefSeqiYP_002870963.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY47568; CAY47568; PFLU_1312.
GeneIDi7819910.
KEGGipfs:PFLU1312.
PATRICi19896850. VBIPseFlu98510_1543.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY47568.1 .
RefSeqi YP_002870963.1. NC_012660.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 216595.PFLU1312.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAY47568 ; CAY47568 ; PFLU_1312 .
GeneIDi 7819910.
KEGGi pfs:PFLU1312.
PATRICi 19896850. VBIPseFlu98510_1543.

Phylogenomic databases

eggNOGi COG1793.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBW25Imported.

Entry informationi

Entry nameiC3K7I7_PSEFS
AccessioniPrimary (citable) accession number: C3K7I7
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: October 29, 2014
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3