C3K3D7 (C3K3D7_PSEFS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative transport-related membrane protein EMBL CAY53030.1

Gene names

Ordered Locus Names:

PFLU_5690 EMBL CAY53030.1

Organism

Pseudomonas fluorescens (strain SBW25) [Complete proteome] [HAMAP] EMBL CAY53030.1

Taxonomic identifier

216595 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Pseudomonadales › Pseudomonadaceae › Pseudomonas › Pseudomonas fluorescens group › Pseudomonas fluorescens

Protein attributes

Sequence length	475 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Biological process	Transport SAAS SAAS004638
Cellular component	Cell membrane SAAS SAAS004638 Membrane
Domain	Transmembrane Transmembrane helix SAAS SAAS004638
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transmembrane transport Inferred from electronic annotation. Source: InterPro
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C3K3D7 [UniParc]. Last modified June 16, 2009. Version 1. Checksum: CDD4A93088BF1CC3	FASTA	475	50,711
	10 20 30 40 50 60 MPNRVPLDAK TARWLPWVVA IAFFMQSLDG TILNTALPAM ARDLAENPLR MQGVVIAYML 70 80 90 100 110 120 TVALLIPASG WIADRFGTKK IFFGAIMLFS IGSLLCALSS SLTMLVGARV IQGLGGALML 130 140 150 160 170 180 PVGRLVVLRA YPRSELVRIM GFITIPGLLG PLLGPTMGGW MVQYLTWHWI FLINLPVGMV 190 200 210 220 230 240 GCYAVWKLIP DLRGSERTRF DGIGFLLFGA AMVLITIAME GLGELHLPHL RVMLLLFGGL 250 260 270 280 290 300 ACLAAYWLRA GHIDNPLFSP VLFKTRTFAV GILGNLFARL GSGALPFLVP LLLQVALGYS 310 320 330 340 350 360 PSEAGMSMLP LAAAAMFAKS IARTLIERLG YRIVLTGNTL ALGIMLASMG LVSEHTPYPL 370 380 390 400 410 420 LLCMLAVLGA INSLQFTAMN TVTLIDLDDA QASSGNSLLS VVAQLSLSLG VACAGALLGG 430 440 450 460 470 FTAETGNDGV ESVLGAFQLT FLTVGIMAML AAAIFLQLSP KDGKRVVSRE HDIEH

References

[1]

"Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens." Silby M.W., Cerdeno-Tarraga A.M., Vernikos G.S., Giddens S.R., Jackson R.W., Preston G.M., Zhang X.X., Moon C.D., Gehrig S.M., Godfrey S.A., Knight C.G., Malone J.G., Robinson Z., Spiers A.J., Harris S., Challis G.L., Yaxley A.M., Harris D. , Seeger K., Murphy L., Rutter S., Squares R., Quail M.A., Saunders E., Mavromatis K., Brettin T.S., Bentley S.D., Hothersall J., Stephens E., Thomas C.M., Parkhill J., Levy S.B., Rainey P.B., Thomson N.R. Genome Biol. 10:R51-R51(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SBW25 EMBL CAY53030.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AM181176 Genomic DNA. Translation: CAY53030.1.
RefSeq	YP_002875183.1. NC_012660.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	216595.PFLU5690.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAY53030; CAY53030; PFLU_5690.
GeneID	7820320.
KEGG	pfs:PFLU5690.
PATRIC	19905502. VBIPseFlu98510_5813.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0477.
OMA	YAVWKFI.
ProtClustDB	CLSK865874.
Family and domain databases
InterPro	IPR004638. Drug-R_transpt_efflux_EmrB. IPR011701. MFS. IPR020846. MFS_dom. IPR016196. MFS_dom_general_subst_transpt. IPR001411. Tet-R_TetB/Drug-R_transptr. [Graphical view]
Pfam	PF07690. MFS_1. 1 hit. [Graphical view]
PRINTS	PR01036. TCRTETB.
SUPFAM	SSF103473. MFS_gen_substrate_transporter. 1 hit.
TIGRFAMs	TIGR00711. efflux_EmrB. 1 hit.
PROSITE	PS50850. MFS. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C3K3D7_PSEFS

Accession

Primary (citable) accession number: C3K3D7

Entry history

Integrated into UniProtKB/TrEMBL:	June 16, 2009
Last sequence update:	June 16, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)