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Protein
Submitted name:

Uncharacterized protein

Gene

PFLU_4372

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. pseudouridine synthase activity Source: InterPro
  2. pseudouridylate synthase activity Source: UniProtKB-EC
  3. RNA binding Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported (EC:4.2.1.70Imported)
Gene namesi
Ordered Locus Names:PFLU_4372Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002332 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU4372.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0564.
KOiK06177.
OMAiARDADTH.
OrthoDBiEOG6P070X.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3K0D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPLSNIHILY QDAAVLVVNK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA
60 70 80 90 100
RIVHRLDWET SGIILLARDA DTHRELSRQF HDRETEKAYT ALAWGQPELD
110 120 130 140 150
SGSIDLPLRY DPPTKPRHVV DHEFGKHALT FWKVLERCGD WCRVELTPIT
160 170 180 190 200
GRSHQLRVHM LSIGHPLLGD GLYAHEQALA AWPRLCLHAS MLSFTHPQSG
210
ERLRFECPAP F
Length:211
Mass (Da):24,047
Last modified:June 16, 2009 - v1
Checksum:i055B7387DB2F7014
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1.
RefSeqiYP_002873907.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY50999; CAY50999; PFLU_4372.
KEGGipfs:PFLU4372.
PATRICi19902858. VBIPseFlu98510_4516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1.
RefSeqiYP_002873907.1. NC_012660.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi216595.PFLU4372.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAY50999; CAY50999; PFLU_4372.
KEGGipfs:PFLU4372.
PATRICi19902858. VBIPseFlu98510_4516.

Phylogenomic databases

eggNOGiCOG0564.
KOiK06177.
OMAiARDADTH.
OrthoDBiEOG6P070X.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBW25Imported.

Entry informationi

Entry nameiC3K0D6_PSEFS
AccessioniPrimary (citable) accession number: C3K0D6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: April 29, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.