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C3K0D6

- C3K0D6_PSEFS

UniProt

C3K0D6 - C3K0D6_PSEFS

Protein

Pseudouridine synthase

Gene

PFLU_4372

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 32 (01 Oct 2014)
      Sequence version 1 (16 Jun 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. lyase activity Source: UniProtKB-KW
    2. pseudouridine synthase activity Source: InterPro
    3. RNA binding Source: InterPro

    GO - Biological processi

    1. pseudouridine synthesis Source: InterPro

    Keywords - Molecular functioni

    IsomeraseUniRule annotation, LyaseImported

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
    Gene namesi
    Ordered Locus Names:PFLU_4372Imported
    OrganismiPseudomonas fluorescens (strain SBW25)Imported
    Taxonomic identifieri216595 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000002332: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi216595.PFLU4372.

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the pseudouridine synthase rluA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0564.
    KOiK06177.
    OMAiERLRFEC.
    OrthoDBiEOG6P070X.

    Family and domain databases

    InterProiIPR020103. PsdUridine_synth_cat_dom.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    [Graphical view]
    PfamiPF00849. PseudoU_synth_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF55120. SSF55120. 1 hit.
    PROSITEiPS01129. PSI_RLU. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C3K0D6-1 [UniParc]FASTAAdd to Basket

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    MPLSNIHILY QDAAVLVVNK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA    50
    RIVHRLDWET SGIILLARDA DTHRELSRQF HDRETEKAYT ALAWGQPELD 100
    SGSIDLPLRY DPPTKPRHVV DHEFGKHALT FWKVLERCGD WCRVELTPIT 150
    GRSHQLRVHM LSIGHPLLGD GLYAHEQALA AWPRLCLHAS MLSFTHPQSG 200
    ERLRFECPAP F 211
    Length:211
    Mass (Da):24,047
    Last modified:June 16, 2009 - v1
    Checksum:i055B7387DB2F7014
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM181176 Genomic DNA. Translation: CAY50999.1.
    RefSeqiYP_002873907.1. NC_012660.1.

    Genome annotation databases

    EnsemblBacteriaiCAY50999; CAY50999; PFLU_4372.
    GeneIDi7818738.
    KEGGipfs:PFLU4372.
    PATRICi19902858. VBIPseFlu98510_4516.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AM181176 Genomic DNA. Translation: CAY50999.1 .
    RefSeqi YP_002873907.1. NC_012660.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 216595.PFLU4372.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAY50999 ; CAY50999 ; PFLU_4372 .
    GeneIDi 7818738.
    KEGGi pfs:PFLU4372.
    PATRICi 19902858. VBIPseFlu98510_4516.

    Phylogenomic databases

    eggNOGi COG0564.
    KOi K06177.
    OMAi ERLRFEC.
    OrthoDBi EOG6P070X.

    Family and domain databases

    InterProi IPR020103. PsdUridine_synth_cat_dom.
    IPR006224. PsdUridine_synth_RluC/D_CS.
    IPR006145. PsdUridine_synth_RsuA/RluD.
    [Graphical view ]
    Pfami PF00849. PseudoU_synth_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF55120. SSF55120. 1 hit.
    PROSITEi PS01129. PSI_RLU. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: SBW25Imported.

    Entry informationi

    Entry nameiC3K0D6_PSEFS
    AccessioniPrimary (citable) accession number: C3K0D6
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 16, 2009
    Last sequence update: June 16, 2009
    Last modified: October 1, 2014
    This is version 32 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3