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C3K0D6

- C3K0D6_PSEFS

UniProt

C3K0D6 - C3K0D6_PSEFS

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Protein

Pseudouridine synthase

Gene

PFLU_4372

Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. lyase activity Source: UniProtKB-KW
  2. pseudouridine synthase activity Source: InterPro
  3. RNA binding Source: InterPro

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation, LyaseImported

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:PFLU_4372Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002332: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU4372.

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
KOiK06177.
OMAiERLRFEC.
OrthoDBiEOG6P070X.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3K0D6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPLSNIHILY QDAAVLVVNK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA
60 70 80 90 100
RIVHRLDWET SGIILLARDA DTHRELSRQF HDRETEKAYT ALAWGQPELD
110 120 130 140 150
SGSIDLPLRY DPPTKPRHVV DHEFGKHALT FWKVLERCGD WCRVELTPIT
160 170 180 190 200
GRSHQLRVHM LSIGHPLLGD GLYAHEQALA AWPRLCLHAS MLSFTHPQSG
210
ERLRFECPAP F
Length:211
Mass (Da):24,047
Last modified:June 16, 2009 - v1
Checksum:i055B7387DB2F7014
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1.
RefSeqiYP_002873907.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY50999; CAY50999; PFLU_4372.
GeneIDi7818738.
KEGGipfs:PFLU4372.
PATRICi19902858. VBIPseFlu98510_4516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1 .
RefSeqi YP_002873907.1. NC_012660.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 216595.PFLU4372.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAY50999 ; CAY50999 ; PFLU_4372 .
GeneIDi 7818738.
KEGGi pfs:PFLU4372.
PATRICi 19902858. VBIPseFlu98510_4516.

Phylogenomic databases

eggNOGi COG0564.
KOi K06177.
OMAi ERLRFEC.
OrthoDBi EOG6P070X.

Family and domain databases

InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBW25Imported.

Entry informationi

Entry nameiC3K0D6_PSEFS
AccessioniPrimary (citable) accession number: C3K0D6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: October 1, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3