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C3K0D6

- C3K0D6_PSEFS

UniProt

C3K0D6 - C3K0D6_PSEFS

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Protein
Pseudouridine synthase
Gene
PFLU_4372
Organism
Pseudomonas fluorescens (strain SBW25)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. RNA binding Source: InterPro
  2. lyase activity Source: UniProtKB-KW
  3. pseudouridine synthase activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. pseudouridine synthesis Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation, LyaseImported

Names & Taxonomyi

Protein namesi
Recommended name:
Pseudouridine synthaseUniRule annotation (EC:5.4.99.-UniRule annotation)
Gene namesi
Ordered Locus Names:PFLU_4372Imported
OrganismiPseudomonas fluorescens (strain SBW25)Imported
Taxonomic identifieri216595 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000002332: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi216595.PFLU4372.

Family & Domainsi

Sequence similaritiesi

Belongs to the pseudouridine synthase rluA family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0564.
KOiK06177.
OMAiERLRFEC.
OrthoDBiEOG6P070X.

Family and domain databases

InterProiIPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view]
PfamiPF00849. PseudoU_synth_2. 1 hit.
[Graphical view]
SUPFAMiSSF55120. SSF55120. 1 hit.
PROSITEiPS01129. PSI_RLU. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C3K0D6-1 [UniParc]FASTAAdd to Basket

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MPLSNIHILY QDAAVLVVNK PTLLLSVPGR ADDNKDCLIT RLQENGYPEA    50
RIVHRLDWET SGIILLARDA DTHRELSRQF HDRETEKAYT ALAWGQPELD 100
SGSIDLPLRY DPPTKPRHVV DHEFGKHALT FWKVLERCGD WCRVELTPIT 150
GRSHQLRVHM LSIGHPLLGD GLYAHEQALA AWPRLCLHAS MLSFTHPQSG 200
ERLRFECPAP F 211
Length:211
Mass (Da):24,047
Last modified:June 16, 2009 - v1
Checksum:i055B7387DB2F7014
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1.
RefSeqiYP_002873907.1. NC_012660.1.

Genome annotation databases

EnsemblBacteriaiCAY50999; CAY50999; PFLU_4372.
GeneIDi7818738.
KEGGipfs:PFLU4372.
PATRICi19902858. VBIPseFlu98510_4516.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AM181176 Genomic DNA. Translation: CAY50999.1 .
RefSeqi YP_002873907.1. NC_012660.1.

3D structure databases

ModBasei Search...

Protein-protein interaction databases

STRINGi 216595.PFLU4372.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAY50999 ; CAY50999 ; PFLU_4372 .
GeneIDi 7818738.
KEGGi pfs:PFLU4372.
PATRICi 19902858. VBIPseFlu98510_4516.

Phylogenomic databases

eggNOGi COG0564.
KOi K06177.
OMAi ERLRFEC.
OrthoDBi EOG6P070X.

Family and domain databases

InterProi IPR020103. PsdUridine_synth_cat_dom.
IPR006224. PsdUridine_synth_RluC/D_CS.
IPR006145. PsdUridine_synth_RsuA/RluD.
[Graphical view ]
Pfami PF00849. PseudoU_synth_2. 1 hit.
[Graphical view ]
SUPFAMi SSF55120. SSF55120. 1 hit.
PROSITEi PS01129. PSI_RLU. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SBW25Imported.

Entry informationi

Entry nameiC3K0D6_PSEFS
AccessioniPrimary (citable) accession number: C3K0D6
Entry historyi
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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