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C3I4W9 (C3I4W9_BACTU) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribonuclease 3 HAMAP MF_00104
EC=3.1.26.3 HAMAP MF_00104
Alternative name(s):
Ribonuclease III HAMAP MF_00104
Gene names
Name:rnc HAMAP MF_00104
ORF Names:bthur0013_38260 EMBL EEM94794.1
OrganismBacillus thuringiensis IBL 200 EMBL EEM94794.1
Taxonomic identifier527019 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus › Bacillus cereus group

Protein attributes

Sequence length245 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Digests double-stranded RNA. Involved in the processing of ribosomal RNA precursors and of some mRNAs By similarity. HAMAP MF_00104 SAAS SAAS011907

Catalytic activity

Endonucleolytic cleavage to 5'-phosphomonoester. HAMAP MF_00104 SAAS SAAS011907

Subcellular location

Cytoplasm By similarity HAMAP MF_00104 SAAS SAAS011907.

Sequence similarities

Contains 1 DRBM (double-stranded RNA-binding) domain. HAMAP MF_00104 SAAS SAAS011907

Contains 1 RNase III domain. HAMAP MF_00104 SAAS SAAS011907

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain19 – 148130RNase III By similarity HAMAP MF_00104
Domain174 – 24370DRBM By similarity HAMAP MF_00104

Sequences

Sequence LengthMass (Da)Tools
C3I4W9 [UniParc].

Last modified June 16, 2009. Version 1.
Checksum: 5667F6DB726C8FFF

FASTA24528,037
        10         20         30         40         50         60 
MPYRKYREKK YETKYREAFK VFQEKIGITF TDEKLLIQAF THSSYVNEHR KKPHEDNERL 

        70         80         90        100        110        120 
EFLGDAVLEL TVSQYLFQKY PTMSEGELTK LRAAIVCEPS LVRFANELSF GSLVLLGKGE 

       130        140        150        160        170        180 
EMTGGRERPA LLADVFEAFI GALYLDQGLE TVWEFLKEIV YPKINEGAFS HVMDYKSQLQ 

       190        200        210        220        230        240 
ELIQRDGSGN VEYQILQEKG PAHNREFVSR VTLNNVALGL GSGKSKKEAE QQAAAEALKK 


LKEQL

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References

[1]"Annotation of the Bacillus thuringiensis IBL 200 genome."
Read T.D., Akmal A., Bishop-Lilly K., Chen P.E., Cook C., Kiley M.P., Lentz S., Mateczun A., Nagarajan N., Nolan N., Osborne B.I., Pop M., Sozhamannan S., Stewart A.C., Sulakvelidze A., Thomason B., Willner K., Zwick M.E.
Submitted (APR-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: IBL 200 EMBL EEM94794.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		ACNK01000074 Genomic DNA. Translation: EEM94794.1.

3D structure databases

ProteinModelPortalC3I4W9.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEBBACT00000138207; EBBACP00000134187; EBBACG00000137270.
PATRIC26110131. VBIBacThu121489_5057.

Family and domain databases

HAMAPMF_00104. RNase_III.
[Tree]
InterProIPR001159. Ds-RNA-bd.
IPR014720. dsRNA-bd-like.
IPR000999. RNase_III.
IPR011907. RNase_III_bac.
[Graphical view]
Gene3DG3DSA:3.30.160.20. dsRNA-bd-like. 1 hit.
G3DSA:1.10.1520.10. RNase_III. 1 hit.
PANTHERPTHR11207. PTHR11207. 1 hit.
PfamPF00035. dsrm. 1 hit.
PF00636. Ribonuclease_3. 1 hit.
[Graphical view]
SMARTSM00358. DSRM. 1 hit.
SM00535. RIBOc. 1 hit.
[Graphical view]
SUPFAMSSF69065. RNase_III. 1 hit.
TIGRFAMsTIGR02191. RNaseIII. 1 hit.
PROSITEPS50137. DS_RBD. 1 hit.
PS00517. RNASE_3_1. 1 hit.
PS50142. RNASE_3_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC3I4W9_BACTU
AccessionPrimary (citable) accession number: C3I4W9
Entry history
Integrated into UniProtKB/TrEMBL: June 16, 2009
Last sequence update: June 16, 2009
Last modified: December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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